Difference between revisions of "PWY0-1295"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate_dehydrogenase_e1_c...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-369 CPD-369] == * smiles: ** C(C(C(C(C(O)CO)O)O)O)O * inchi key: ** InChIKey=FBPFZTCFMRRESA...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-369 CPD-369] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** C(C(C(C(C(O)CO)O)O)O)O
 +
* inchi key:
 +
** InChIKey=FBPFZTCFMRRESA-UNTFVMJOSA-N
 
* common name:
 
* common name:
** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
+
** L-iditol
** dihydrolipoamide_acetyltransferase
+
* molecular weight:
** ORF
+
** 182.173   
* ec number:
+
** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
== Reaction(s) known to produce the compound ==
** 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
+
== Reaction(s) of unknown directionality ==
* With common name(s):
+
* [[L-IDITOL-2-DEHYDROGENASE-RXN]]
** 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_17539]]
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_2693]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_7519]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_6983]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_2515]]
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
== Pathways  ==
+
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[esiliculosus]]
+
* [[manual]]:
+
** [[primary_network]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[experimental_annotation]]
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* CAS : 488-45-9
** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
+
* PUBCHEM:
* UNIPROT:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460044 5460044]
** [http://www.uniprot.org/uniprot/P06959 P06959]
+
* HMDB : HMDB11632
** [http://www.uniprot.org/uniprot/P26267 P26267]
+
* LIGAND-CPD:
** [http://www.uniprot.org/uniprot/P35485 P35485]
+
** [http://www.genome.jp/dbget-bin/www_bget?C01507 C01507]
** [http://www.uniprot.org/uniprot/Q59097 Q59097]
+
* CHEMSPIDER:
** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
+
** [http://www.chemspider.com/Chemical-Structure.4573729.html 4573729]
** [http://www.uniprot.org/uniprot/P45119 P45119]
+
* CHEBI:
** [http://www.uniprot.org/uniprot/P11966 P11966]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18202 18202]
** [http://www.uniprot.org/uniprot/P35488 P35488]
+
* METABOLIGHTS : MTBLC18202
** [http://www.uniprot.org/uniprot/P47515 P47515]
+
{{#set: smiles=C(C(C(C(C(O)CO)O)O)O)O}}
** [http://www.uniprot.org/uniprot/P21882 P21882]
+
{{#set: inchi key=InChIKey=FBPFZTCFMRRESA-UNTFVMJOSA-N}}
** [http://www.uniprot.org/uniprot/P47516 P47516]
+
{{#set: common name=L-iditol}}
** [http://www.uniprot.org/uniprot/P21881 P21881]
+
{{#set: molecular weight=182.173    }}
** [http://www.uniprot.org/uniprot/P21873 P21873]
+
{{#set: consumed or produced by=L-IDITOL-2-DEHYDROGENASE-RXN}}
** [http://www.uniprot.org/uniprot/P16387 P16387]
+
** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
+
** [http://www.uniprot.org/uniprot/P08559 P08559]
+
** [http://www.uniprot.org/uniprot/P11177 P11177]
+
** [http://www.uniprot.org/uniprot/P29803 P29803]
+
** [http://www.uniprot.org/uniprot/P29804 P29804]
+
** [http://www.uniprot.org/uniprot/P26284 P26284]
+
** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
+
** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
+
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
+
** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
+
** [http://www.uniprot.org/uniprot/Q09171 Q09171]
+
** [http://www.uniprot.org/uniprot/P52901 P52901]
+
** [http://www.uniprot.org/uniprot/P79931 P79931]
+
** [http://www.uniprot.org/uniprot/P79932 P79932]
+
** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
+
** [http://www.uniprot.org/uniprot/P10801 P10801]
+
** [http://www.uniprot.org/uniprot/P21874 P21874]
+
** [http://www.uniprot.org/uniprot/P49432 P49432]
+
** [http://www.uniprot.org/uniprot/Q59820 Q59820]
+
** [http://www.uniprot.org/uniprot/P35486 P35486]
+
** [http://www.uniprot.org/uniprot/P35487 P35487]
+
** [http://www.uniprot.org/uniprot/Q06437 Q06437]
+
** [http://www.uniprot.org/uniprot/P32473 P32473]
+
** [http://www.uniprot.org/uniprot/Q59107 Q59107]
+
** [http://www.uniprot.org/uniprot/P73405 P73405]
+
** [http://www.uniprot.org/uniprot/Q49109 Q49109]
+
** [http://www.uniprot.org/uniprot/O48685 O48685]
+
** [http://www.uniprot.org/uniprot/P52902 P52902]
+
** [http://www.uniprot.org/uniprot/P52904 P52904]
+
** [http://www.uniprot.org/uniprot/P52903 P52903]
+
** [http://www.uniprot.org/uniprot/O66112 O66112]
+
** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
+
** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
+
** [http://www.uniprot.org/uniprot/O69478 O69478]
+
** [http://www.uniprot.org/uniprot/P10802 P10802]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}}
+
{{#set: common name=dihydrolipoamide_acetyltransferase}}
+
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.2.4.1}}
+
{{#set: gene associated=Tiso_gene_17539|Tiso_gene_2693|Tiso_gene_7519|Tiso_gene_6983|Tiso_gene_2515}}
+
{{#set: in pathway=PYRUVDEHYD-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:27, 10 January 2018

Metabolite CPD-369

  • smiles:
    • C(C(C(C(C(O)CO)O)O)O)O
  • inchi key:
    • InChIKey=FBPFZTCFMRRESA-UNTFVMJOSA-N
  • common name:
    • L-iditol
  • molecular weight:
    • 182.173
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 488-45-9
  • PUBCHEM:
  • HMDB : HMDB11632
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC18202