Difference between revisions of "Tiso gene 13142"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-bindi...")
(Created page with "Category:Gene == Gene Tiso_gene_13142 == * right end position: ** 4981 * transcription direction: ** NEGATIVE * left end position: ** 1534 * centisome position: ** 23.6072...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] ==
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== Gene Tiso_gene_13142 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4981
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* common name:
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* transcription direction:
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** gtp-binding_protein
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.5.1.3 EC-6.5.1.3]
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** 1534
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* centisome position:
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** 23.607264   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[THREONINE--TRNA-LIGASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[3Prime-OH-Terminated-RNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 an [RNA]-3'-hydroxyl[c] '''=>''' 1 AMP[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8398]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8397]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8396]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4981}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=1534}}
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** [http://www.uniprot.org/uniprot/P00971 P00971]
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{{#set: centisome position=23.607264    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=THREONINE--TRNA-LIGASE-RXN}}
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{{#set: common name=gtp-binding_protein}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: ec number=EC-6.5.1.3}}
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{{#set: gene associated=Tiso_gene_8398|Tiso_gene_8397|Tiso_gene_8396}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:55, 21 March 2018

Gene Tiso_gene_13142

  • right end position:
    • 4981
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1534
  • centisome position:
    • 23.607264
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13142&oldid=44656"