Difference between revisions of "Tiso gene 17718"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17791 RXN-17791] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
(Created page with "Category:Gene == Gene Tiso_gene_17718 == * right end position: ** 3165 * transcription direction: ** POSITIVE * left end position: ** 372 * centisome position: ** 10.62857...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17791 RXN-17791] ==
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== Gene Tiso_gene_17718 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3165
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* common name:
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* transcription direction:
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** thiolase
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** POSITIVE
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** acetyl-_c-acetyltransferase
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* left end position:
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** 3-ketoacyl-_thiolase
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** 372
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** 10.6285715   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-19158]][c] '''=>''' 1 [[CPD-19147]][c] '''+''' 1 [[ACETYL-COA]][c]
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** Source: [[orthology-athaliana]]
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* With common name(s):
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** Source: [[orthology-esiliculosus]]
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** 1 coenzyme A[c] '''+''' 1 3-oxo-(9Z)-hexadecenoyl-CoA[c] '''=>''' 1 (7Z)-tetradecenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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* Reaction: [[ASPAMINOTRANS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3855]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_15327]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[PHEAMINOTRANS-RXN]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-10814]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_3856]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Reaction: [[RXN-11737]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[orthology-athaliana]]
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== Reconstruction information  ==
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** Source: [[orthology-esiliculosus]]
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* Category: [[annotation]]
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* Reaction: [[RXN-13697]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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* Reaction: [[TYROSINE-AMINOTRANSFERASE-RXN]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[TYRSYN]]
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* [[PWY-7383]]
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* [[ASPARTATESYN-PWY]]
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* [[PWY-7117]]
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* [[PWY-7115]]
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* [[PWY-5329]]
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* [[PWY-5754]]
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* [[PWY-5048]]
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* [[PWY-5913]]
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* [[CYSTEINE-DEG-PWY]]
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* [[PWY-6643]]
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* [[PWY-6642]]
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* [[PWY-7432]]
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* [[PWY-7518]]
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* [[PWY-7514]]
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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* [[TYRFUMCAT-PWY]]
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* [[PWY-3581]]
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* [[ASPARTATE-DEG1-PWY]]
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* [[PWY0-1534]]
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* [[PWY-5886]]
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* [[GLUTDEG-PWY]]
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* [[PWY-6318]]
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* [[PWY-5079]]
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* [[ANAPHENOXI-PWY]]
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* [[PWY3O-4108]]
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* [[PHESYN]]
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* [[PWY-6638]]
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* [[ASPARAGINE-DEG1-PWY-1]]
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* [[PWY-5151]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3165}}
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{{#set: common name=thiolase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: left end position=372}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: centisome position=10.6285715    }}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: reaction associated=3-SULFINOALANINE-AMINOTRANSFERASE-RXN|ASPAMINOTRANS-RXN|CYSTEINE-AMINOTRANSFERASE-RXN|PHEAMINOTRANS-RXN|RXN-10814|RXN-11737|RXN-13697|TYROSINE-AMINOTRANSFERASE-RXN}}
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{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_10116}}
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{{#set: pathway associated=TYRSYN|PWY-7383|ASPARTATESYN-PWY|PWY-7117|PWY-7115|PWY-5329|PWY-5754|PWY-5048|PWY-5913|CYSTEINE-DEG-PWY|PWY-6643|PWY-6642|PWY-7432|PWY-7518|PWY-7514|MALATE-ASPARTATE-SHUTTLE-PWY|TYRFUMCAT-PWY|PWY-3581|ASPARTATE-DEG1-PWY|PWY0-1534|PWY-5886|GLUTDEG-PWY|PWY-6318|PWY-5079|ANAPHENOXI-PWY|PWY3O-4108|PHESYN|PWY-6638|ASPARAGINE-DEG1-PWY-1|PWY-5151}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:56, 21 March 2018

Gene Tiso_gene_17718

  • right end position:
    • 3165
  • transcription direction:
    • POSITIVE
  • left end position:
    • 372
  • centisome position:
    • 10.6285715
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17718&oldid=44734"