Difference between revisions of "Tiso gene 15942"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-169 RXN1F-169] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_15942 == * right end position: ** 2192 * transcription direction: ** POSITIVE * left end position: ** 249 * centisome position: ** 5.310301...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-169 RXN1F-169] ==
+
== Gene Tiso_gene_15942 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2192
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
** POSITIVE
 +
* left end position:
 +
** 249
 +
* centisome position:
 +
** 5.310301   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DIHYDROFOLATESYNTH-RXN]]
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-96]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-140]][c] '''+''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A19[c] '''=>''' 1 H+[c] '''+''' 1 gibberellin A20[c] '''+''' 2 CO2[c] '''+''' 1 succinate[c]
+
* Reaction: [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[FORMYLTHFGLUSYNTH-RXN]]
−
* Gene: [[Tiso_gene_3330]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** Assignment: ec-number
−
== Pathways  ==
+
* Reaction: [[RXN-6341]]
−
* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
+
** Source: [[annotation-in-silico_annotation]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
*** Assignment: ec-number
−
== Reconstruction information  ==
+
* Reaction: [[RXN0-2921]]
−
* Category: [[orthology]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** Assignment: ec-number
−
*** Tool: [[pantograph]]
+
== Pathways associated ==
 +
* [[PWY-2161]]
 +
* [[PWY-6614]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=2192}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03807 R03807]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=249}}
−
{{#set: ec number=EC-1.14.11}}
+
{{#set: centisome position=5.310301    }}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: reaction associated=DIHYDROFOLATESYNTH-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|FORMYLTHFGLUSYNTH-RXN|RXN-6341|RXN0-2921}}
−
{{#set: in pathway=PWY-5035}}
+
{{#set: pathway associated=PWY-2161|PWY-6614}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:57, 21 March 2018

Gene Tiso_gene_15942

  • right end position:
    • 2192
  • transcription direction:
    • POSITIVE
  • left end position:
    • 249
  • centisome position:
    • 5.310301
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15942&oldid=44852"