Difference between revisions of "TRNA-uridine13"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.23-RXN 3.2.1.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyprotein ** glycos...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-uridine13 tRNA-uridine13] == * common name: ** a uridine13 in tRNA * Synonym(s): ** a tRNA...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.23-RXN 3.2.1.23-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-uridine13 tRNA-uridine13] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** polyprotein
+
** a uridine13 in tRNA
** glycoside_hydrolase
+
* ec number:
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** a tRNA uridine13
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[RXN-11841]]
** 1 [[WATER]][c] '''+''' 1 [[Beta-D-Galactosides]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Non-Galactosylated-Galactose-Acceptors]][c]
+
== Reaction(s) known to produce the compound ==
* With common name(s):
+
== Reaction(s) of unknown directionality ==
** 1 H2O[c] '''+''' 1 a β-D-galactoside[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 a non galactosylated galactose acceptor[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* Gene: [[Tiso_gene_12839]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_17558]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_1398]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
+
== Pathways  ==
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
{{#set: common name=a uridine13 in tRNA}}
** [http://www.uniprot.org/uniprot/P06219 P06219]
+
{{#set: common name=a tRNA uridine13}}
** [http://www.uniprot.org/uniprot/P11175 P11175]
+
{{#set: consumed by=RXN-11841}}
** [http://www.uniprot.org/uniprot/P19668 P19668]
+
** [http://www.uniprot.org/uniprot/P20043 P20043]
+
** [http://www.uniprot.org/uniprot/P16278 P16278]
+
** [http://www.uniprot.org/uniprot/P23780 P23780]
+
** [http://www.uniprot.org/uniprot/P24131 P24131]
+
** [http://www.uniprot.org/uniprot/Q02603 Q02603]
+
** [http://www.uniprot.org/uniprot/Q53790 Q53790]
+
** [http://www.uniprot.org/uniprot/P23989 P23989]
+
** [http://www.uniprot.org/uniprot/P48982 P48982]
+
** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
+
** [http://www.uniprot.org/uniprot/Q02604 Q02604]
+
** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
+
** [http://www.uniprot.org/uniprot/O58247 O58247]
+
** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
+
** [http://www.uniprot.org/uniprot/P00722 P00722]
+
** [http://www.uniprot.org/uniprot/P06864 P06864]
+
** [http://www.uniprot.org/uniprot/Q47170 Q47170]
+
** [http://www.uniprot.org/uniprot/Q59140 Q59140]
+
** [http://www.uniprot.org/uniprot/P00723 P00723]
+
** [http://www.uniprot.org/uniprot/P94248 P94248]
+
** [http://www.uniprot.org/uniprot/O31341 O31341]
+
** [http://www.uniprot.org/uniprot/P22498 P22498]
+
** [http://www.uniprot.org/uniprot/Q02401 Q02401]
+
** [http://www.uniprot.org/uniprot/P26257 P26257]
+
** [http://www.uniprot.org/uniprot/Q59422 Q59422]
+
** [http://www.uniprot.org/uniprot/P30812 P30812]
+
** [http://www.uniprot.org/uniprot/Q12660 Q12660]
+
** [http://www.uniprot.org/uniprot/P45582 P45582]
+
** [http://www.uniprot.org/uniprot/P49676 P49676]
+
** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
+
** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
+
** [http://www.uniprot.org/uniprot/O81100 O81100]
+
** [http://www.uniprot.org/uniprot/Q42150 Q42150]
+
** [http://www.uniprot.org/uniprot/P48980 P48980]
+
** [http://www.uniprot.org/uniprot/P48981 P48981]
+
** [http://www.uniprot.org/uniprot/O86616 O86616]
+
** [http://www.uniprot.org/uniprot/P70753 P70753]
+
** [http://www.uniprot.org/uniprot/P29853 P29853]
+
** [http://www.uniprot.org/uniprot/P94804 P94804]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=polyprotein}}
+
{{#set: common name=glycoside_hydrolase}}
+
{{#set: ec number=EC-3.2.1.23}}
+
{{#set: gene associated=Tiso_gene_12839|Tiso_gene_17558|Tiso_gene_1398}}
+
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:59, 21 March 2018

Metabolite tRNA-uridine13

  • common name:
    • a uridine13 in tRNA
  • Synonym(s):
    • a tRNA uridine13

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links