Difference between revisions of "Tiso gene 2386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** trypsin_family ** try...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** kynureninase
+
** trypsin_family
 +
** trypsin
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.7.1.3 EC-3.7.1.3]
+
** [http://enzyme.expasy.org/EC/3.4.21.4 EC-3.4.21.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-HYDROXY-L-KYNURENINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[3-HYDROXY-ANTHRANILATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-hydroxy-L-kynurenine[c] '''+''' 1 H2O[c] '''=>''' 1 L-alanine[c] '''+''' 1 3-hydroxyanthranilate[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10684]]
+
* [[Tiso_gene_1761]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13074]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_10685]]
+
* [[Tiso_gene_12875]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_17883]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2777]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4147]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_8820]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1997]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_20549]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1341]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_19324]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4842]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13684]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
 
−
** '''9''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25143 25143]
+
** [http://www.uniprot.org/uniprot/P07477 P07477]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P08426 P08426]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02668 R02668]
+
** [http://www.uniprot.org/uniprot/P35051 P35051]
 +
** [http://www.uniprot.org/uniprot/P19799 P19799]
 +
** [http://www.uniprot.org/uniprot/Q7M434 Q7M434]
 +
** [http://www.uniprot.org/uniprot/Q7M435 Q7M435]
 +
** [http://www.uniprot.org/uniprot/Q7M390 Q7M390]
 +
** [http://www.uniprot.org/uniprot/Q7LZP8 Q7LZP8]
 +
** [http://www.uniprot.org/uniprot/Q7LZF8 Q7LZF8]
 +
** [http://www.uniprot.org/uniprot/Q7M433 Q7M433]
 +
** [http://www.uniprot.org/uniprot/P07146 P07146]
 +
** [http://www.uniprot.org/uniprot/P07478 P07478]
 +
** [http://www.uniprot.org/uniprot/Q7M3N1 Q7M3N1]
 +
** [http://www.uniprot.org/uniprot/Q7M432 Q7M432]
 +
** [http://www.uniprot.org/uniprot/P32821 P32821]
 +
** [http://www.uniprot.org/uniprot/P32822 P32822]
 +
** [http://www.uniprot.org/uniprot/P12788 P12788]
 +
** [http://www.uniprot.org/uniprot/P35050 P35050]
 +
** [http://www.uniprot.org/uniprot/Q29463 Q29463]
 +
** [http://www.uniprot.org/uniprot/P35034 P35034]
 +
** [http://www.uniprot.org/uniprot/P35031 P35031]
 +
** [http://www.uniprot.org/uniprot/P35032 P35032]
 +
** [http://www.uniprot.org/uniprot/P35033 P35033]
 +
** [http://www.uniprot.org/uniprot/P35030 P35030]
 +
** [http://www.uniprot.org/uniprot/P35035 P35035]
 +
** [http://www.uniprot.org/uniprot/P35036 P35036]
 +
** [http://www.uniprot.org/uniprot/P16049 P16049]
 +
** [http://www.uniprot.org/uniprot/Q91041 Q91041]
 +
** [http://www.uniprot.org/uniprot/P35038 P35038]
 +
** [http://www.uniprot.org/uniprot/P35041 P35041]
 +
** [http://www.uniprot.org/uniprot/P35037 P35037]
 +
** [http://www.uniprot.org/uniprot/Q92099 Q92099]
 +
** [http://www.uniprot.org/uniprot/Q27761 Q27761]
 +
** [http://www.uniprot.org/uniprot/Q90629 Q90629]
 +
** [http://www.uniprot.org/uniprot/Q90628 Q90628]
 +
** [http://www.uniprot.org/uniprot/Q90627 Q90627]
 +
** [http://www.uniprot.org/uniprot/Q7M436 Q7M436]
 +
** [http://www.uniprot.org/uniprot/P35045 P35045]
 +
** [http://www.uniprot.org/uniprot/P00765 P00765]
 +
** [http://www.uniprot.org/uniprot/P00764 P00764]
 +
** [http://www.uniprot.org/uniprot/P06872 P06872]
 +
** [http://www.uniprot.org/uniprot/P06871 P06871]
 +
** [http://www.uniprot.org/uniprot/P00761 P00761]
 +
** [http://www.uniprot.org/uniprot/P00762 P00762]
 +
** [http://www.uniprot.org/uniprot/P00763 P00763]
 +
** [http://www.uniprot.org/uniprot/P00775 P00775]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=kynureninase}}
+
{{#set: common name=trypsin_family}}
−
{{#set: ec number=EC-3.7.1.3}}
+
{{#set: common name=trypsin}}
−
{{#set: gene associated=Tiso_gene_10684|Tiso_gene_10685}}
+
{{#set: ec number=EC-3.4.21.4}}
−
{{#set: in pathway=PWY-5651|PWY-6309}}
+
{{#set: gene associated=Tiso_gene_1761|Tiso_gene_13074|Tiso_gene_12875|Tiso_gene_17883|Tiso_gene_2777|Tiso_gene_4147|Tiso_gene_8820|Tiso_gene_1997|Tiso_gene_20549|Tiso_gene_1341|Tiso_gene_19324|Tiso_gene_4842|Tiso_gene_13684}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:27, 10 January 2018

Reaction 3.4.21.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trypsin_family
    • trypsin
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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