Difference between revisions of "CPD-11408"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALACETIC_ACID OXALACETIC_ACID] == * smiles: ** C(C([O-])=O)C(=O)C([O-])=O * inchi key: ** InC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13001 RXN-13001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALACETIC_ACID OXALACETIC_ACID] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13001 RXN-13001] ==
* smiles:
+
* direction:
** C(C([O-])=O)C(=O)C([O-])=O
+
** LEFT-TO-RIGHT
* inchi key:
+
* ec number:
** InChIKey=KHPXUQMNIQBQEV-UHFFFAOYSA-L
+
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
* common name:
+
** oxaloacetate
+
* molecular weight:
+
** 130.057   
+
 
* Synonym(s):
 
* Synonym(s):
** keto-oxaloacetate
 
** oxaloacetic acid
 
** oxalacetic acid
 
** oxalacetate
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[CSm]]
+
* With identifiers:
* [[PEPCARBOXYKIN-RXN]]
+
** 1 [[CPD-14419]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14420]][c]
* [[OXALODECARB-RXN]]
+
* With common name(s):
* [[CSx]]
+
** 1 3R-hydroxy-icosatrienoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 icosatrienoyl-2-enoyl CoA[c]
* [[CITSYN-RXN]]
+
 
== Reaction(s) known to produce the compound ==
+
== Genes associated with this reaction  ==
* [[PCr]]
+
== Pathways  ==
* [[R00357]]
+
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
* [[PYRUVATE-CARBOXYLASE-RXN]]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
== Reaction(s) of unknown directionality ==
+
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
* [[RXN-13697]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
* [[ASPAMINOTRANS-RXN]]
+
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
* [[OAACITtm]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
* [[OAAAKGtm]]
+
== Reconstruction information  ==
* [[MALATE-DEH-RXN]]
+
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* CAS : 328-42-7
+
{{#set: direction=LEFT-TO-RIGHT}}
* METABOLIGHTS : MTBLC16452
+
{{#set: ec number=EC-4.2.1.134}}
* PUBCHEM:
+
{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=164550 164550]
+
{{#set: reconstruction category=annotation}}
* HMDB : HMDB00223
+
{{#set: reconstruction tool=pathwaytools}}
* LIGAND-CPD:
+
{{#set: reconstruction source=in-silico_annotation}}
** [http://www.genome.jp/dbget-bin/www_bget?C00036 C00036]
+
* CHEMSPIDER:
+
** [http://www.chemspider.com/Chemical-Structure.144251.html 144251]
+
* CHEBI:
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16452 16452]
+
* BIGG : oaa
+
{{#set: smiles=C(C([O-])=O)C(=O)C([O-])=O}}
+
{{#set: inchi key=InChIKey=KHPXUQMNIQBQEV-UHFFFAOYSA-L}}
+
{{#set: common name=oxaloacetate}}
+
{{#set: molecular weight=130.057    }}
+
{{#set: common name=keto-oxaloacetate|oxaloacetic acid|oxalacetic acid|oxalacetate}}
+
{{#set: consumed by=CSm|PEPCARBOXYKIN-RXN|OXALODECARB-RXN|CSx|CITSYN-RXN}}
+
{{#set: produced by=PCr|R00357|PYRUVATE-CARBOXYLASE-RXN}}
+
{{#set: consumed or produced by=RXN-13697|ASPAMINOTRANS-RXN|OAACITtm|OAAAKGtm|MALATE-DEH-RXN}}
+

Revision as of 17:27, 10 January 2018

Reaction RXN-13001

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3R-hydroxy-icosatrienoyl-CoA[c] => 1 H2O[c] + 1 icosatrienoyl-2-enoyl CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7619, juniperonate biosynthesis: PWY-7619
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links