Difference between revisions of "Tiso gene 4088"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17352 RXN-17352] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase ** ORF...")
(Created page with "Category:Gene == Gene Tiso_gene_4088 == * right end position: ** 13398 * transcription direction: ** POSITIVE * left end position: ** 6115 * centisome position: ** 39.6203...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17352 RXN-17352] ==
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== Gene Tiso_gene_4088 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 13398
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* common name:
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* transcription direction:
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** ascorbate_peroxidase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 6115
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** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
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* centisome position:
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** 39.62032   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11135]]
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** 2 [[CONIFERYL-ALCOHOL]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-18761]][c]
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* With common name(s):
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** 2 coniferyl alcohol[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 2 coniferyl alcohol radical[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11016]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15820]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15962]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6824]], justicidin B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6824 PWY-6824]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5466]], matairesinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5466 PWY-5466]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]], sesamin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5469 PWY-5469]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=13398}}
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{{#set: common name=ascorbate_peroxidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=6115}}
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{{#set: ec number=EC-1.11.1.7}}
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{{#set: centisome position=39.62032    }}
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{{#set: gene associated=Tiso_gene_11016|Tiso_gene_15820|Tiso_gene_15962}}
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{{#set: reaction associated=RXN-11135}}
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{{#set: in pathway=PWY-6824|PWY-5466|PWY-5469}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_4088

  • right end position:
    • 13398
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6115
  • centisome position:
    • 39.62032
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4088&oldid=45593"