Difference between revisions of "DETHIOBIOTIN-SYN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_1773 == * right end position: ** 18855 * transcription direction: ** POSITIVE * left end position: ** 16660 * centisome position: ** 76.601...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adeno...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1773 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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* right end position:
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* direction:
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** 18855
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
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* left end position:
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* ec number:
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** 16660
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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* centisome position:
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** 76.60123   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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* Reaction: [[GLUTAMIN-RXN]]
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** 1 CO2[c] '''+''' 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 3 H+[c] '''+''' 1 dethiobiotin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11635]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN-12878]]
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== Pathways  ==
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-6964]]
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* [[GLUTAMINDEG-PWY]]
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* [[PWY-4341]]
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* [[CITRULBIO-PWY]]
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* [[PWY-6549]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=18855}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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{{#set: left end position=16660}}
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* LIGAND-RXN:
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{{#set: centisome position=76.60123    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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{{#set: reaction associated=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|GLUTAMIN-RXN|RXN-12878}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6964|GLUTAMINDEG-PWY|PWY-4341|CITRULBIO-PWY|PWY-6549}}
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=adenosylmethionine-8-amino-7-oxononanoate_aminotransferase}}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: gene associated=Tiso_gene_11635}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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