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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPMANDEHYDRA-RXN GDPMANDEHYDRA-RXN] == | + | == Gene Tiso_gene_16842 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** GDP-mannose 4,6-dehydratase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.47 EC-4.2.1.47]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[1.14.11.2-RXN]] |
| − | ** 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[WATER]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 GDP-α-D-mannose[c] '''=>''' 1 GDP-4-dehydro-α-D-rhamnose[c] '''+''' 1 H2O[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_13093]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | * Gene: [[Tiso_gene_13092]] | + | * Reaction: [[RXN490-3641]] |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways ==
| + | |
| − | * [[GDPRHAMSYN-PWY]], GDP-D-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
| + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-5740]], GDP-L-colitose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5740 PWY-5740]
| + | |
| − | ** '''1''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-7573]], GDP-mycosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7573 PWY-7573]
| + | |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-5738]], GDP-6-deoxy-D-talose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5738 PWY-5738]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-5739]], GDP-D-perosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5739 PWY-5739]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=1.14.11.2-RXN|RXN490-3641}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23820 23820]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00888 R00888]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q84439 Q84439]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=GDP-mannose 4,6-dehydratase}}
| + | |
| − | {{#set: ec number=EC-4.2.1.47}}
| + | |
| − | {{#set: gene associated=Tiso_gene_13093|Tiso_gene_13092}}
| + | |
| − | {{#set: in pathway=GDPRHAMSYN-PWY|PWY-66|PWY-5740|PWY-7573|PWY-5738|PWY-5739}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
