Difference between revisions of "RXN-7605"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_5911 == * right end position: ** 6643 * transcription direction: ** NEGATIVE * left end position: ** 3327 * centisome position: ** 26.03897...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_5911 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605] ==
−
* right end position:
+
* direction:
−
** 6643
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1]
−
* left end position:
+
−
** 3327
+
−
* centisome position:
+
−
** 26.038977   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[5-NUCLEOTID-RXN]]
+
* With identifiers:
−
** Source: [[annotation-in-silico_annotation]]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Demethylated-methyl-acceptors]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Methylated-methyl-acceptors]][c]
−
*** Assignment: automated-name-match
+
* With common name(s):
−
* Reaction: [[AMP-DEPHOSPHORYLATION-RXN]]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a demethylated methyl donor[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a methylated methyl donor[c]
−
** Source: [[annotation-in-silico_annotation]]
+
 
−
*** Assignment: automated-name-match
+
== Genes associated with this reaction  ==
−
* Reaction: [[NARP]]
+
== Pathways  ==
−
** Source: [[orthology-creinhardtii]]
+
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
−
* Reaction: [[NRPH]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** Source: [[orthology-creinhardtii]]
+
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
−
* Reaction: [[RXN-14025]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** Source: [[annotation-in-silico_annotation]]
+
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
−
*** Assignment: automated-name-match
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* Reaction: [[RXN-14026]]
+
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
−
** Source: [[annotation-in-silico_annotation]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
*** Assignment: automated-name-match
+
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
−
* Reaction: [[RXN-14227]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
** Source: [[annotation-in-silico_annotation]]
+
* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
−
*** Assignment: automated-name-match
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* Reaction: [[RXN-5841]]
+
== Reconstruction information  ==
−
** Source: [[annotation-in-silico_annotation]]
+
* Category: [[annotation]]
−
*** Assignment: automated-name-match
+
** Source: [[annotation-experimental_annotation]]
−
* Reaction: [[RXN-7607]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: automated-name-match
+
−
* Reaction: [[RXN-7609]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: automated-name-match
+
−
* Reaction: [[XMPXAN-RXN]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: automated-name-match
+
−
== Pathways associated ==
+
−
* [[PWY-5381]]
+
−
* [[PWY-6607]]
+
−
* [[PWY-7185]]
+
−
* [[PWY-7821]]
+
−
* [[SALVADEHYPOX-PWY]]
+
−
* [[PWY-6596]]
+
−
* [[NAD-BIOSYNTHESIS-II]]
+
−
* [[PWY-6606]]
+
−
* [[PWY-6608]]
+
−
* [[PWY-5695]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=6643}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=NEGATIVE}}
+
{{#set: ec number=EC-2.1.1}}
−
{{#set: left end position=3327}}
+
{{#set: in pathway=METHIONINE-DEG1-PWY|PWY-I9|PWY-5041|PWY-6154|PWY-6151|PWY-6153}}
−
{{#set: centisome position=26.038977    }}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|NARP|NRPH|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
+
{{#set: reconstruction source=annotation-experimental_annotation}}
−
{{#set: pathway associated=PWY-5381|PWY-6607|PWY-7185|PWY-7821|SALVADEHYPOX-PWY|PWY-6596|NAD-BIOSYNTHESIS-II|PWY-6606|PWY-6608|PWY-5695}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:04, 21 March 2018

Reaction RXN-7605

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine): METHIONINE-DEG1-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6154, autoinducer AI-2 biosynthesis II (Vibrio): PWY-6154
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6153, autoinducer AI-2 biosynthesis I: PWY-6153
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7605&oldid=45676"