Difference between revisions of "PGCM"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide-a monooxygenas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGCM PGCM] == * direction: ** REVERSIBLE * common name: ** phosphoglucomutase * Synonym(s): == Rea...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGCM PGCM] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** chlorophyllide-a monooxygenase
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** phosphoglucomutase
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** rieske_2fe-2sdomainiss
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−
** tic55_component_of_chloroplast_import_machinery
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−
** isp_domain-containing_protein
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* Synonym(s):
 
* Synonym(s):
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
−
** CAO
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7015]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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** 1.0 [[GLC-1-P]][c] '''<=>''' 1.0 [[ALPHA-GLC-6-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 oxygen[c] '''=>''' 1 71-hydroxychlorophyllide a[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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** 1.0 &alpha;-D-glucopyranose 1-phosphate[c] '''<=>''' 1.0 &alpha;-D-glucose 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_152]]
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* Gene: [[Tiso_gene_13477]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
−
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4816]]
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* Gene: [[Tiso_gene_8091]]
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** Source: [[orthology-creinhardtii]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_4002]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_13817]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_12611]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22676 22676]
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{{#set: common name=phosphoglucomutase}}
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* LIGAND-RXN:
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{{#set: gene associated=Tiso_gene_13477|Tiso_gene_4816}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08203 R08203]
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{{#set: in pathway=}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=chlorophyllide-a monooxygenase}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: common name=rieske_2fe-2sdomainiss}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: common name=tic55_component_of_chloroplast_import_machinery}}
+
−
{{#set: common name=isp_domain-containing_protein}}
+
−
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
+
−
{{#set: gene associated=Tiso_gene_152|Tiso_gene_8091|Tiso_gene_4002|Tiso_gene_13817|Tiso_gene_12611}}
+
−
{{#set: in pathway=PWY-5068}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:04, 21 March 2018

Reaction PGCM

  • direction:
    • REVERSIBLE
  • common name:
    • phosphoglucomutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 α-D-glucopyranose 1-phosphate[c] <=> 1.0 α-D-glucose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PGCM&oldid=45736"