Difference between revisions of "COUMARATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-AMINOTRANSFERASE-RXN CYSTEINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * common...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] == * smiles: ** C(=O)([O-])C=CC1(=CC=C(O)C=C1) * common name: ** 4-coumara...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-AMINOTRANSFERASE-RXN CYSTEINE-AMINOTRANSFERASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(=O)([O-])C=CC1(=CC=C(O)C=C1)
 
* common name:
 
* common name:
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** cysteine transaminase
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** 4-coumarate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.6.1.3 EC-2.6.1.3]
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** InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M
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* molecular weight:
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** 163.152   
 
* Synonym(s):
 
* Synonym(s):
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** 4-hydroxycinnamate
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** 4-hydroxycinnamic acid
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** p-coumarate
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** trans-4-hydroxycinnamate
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** p-coumaric acid
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** trans-p-hydroxycinnamate
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** trans-4-coumarate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[CYS]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[3-MERCAPTO-PYRUVATE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
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** 1 L-cysteine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-mercaptopyruvate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6815]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_17718]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5329]], L-cysteine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5329 PWY-5329]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1534]], hydrogen sulfide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1534 PWY0-1534]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 7400-08-0
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17441 17441]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54708745 54708745]
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** [http://www.genome.jp/dbget-bin/www_bget?R00895 R00895]
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* HMDB : HMDB02035
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{{#set: direction=REVERSIBLE}}
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* LIGAND-CPD:
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{{#set: common name=cysteine transaminase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00811 C00811]
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{{#set: ec number=EC-2.6.1.3}}
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* CHEMSPIDER:
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{{#set: gene associated=Tiso_gene_6815|Tiso_gene_17718}}
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** [http://www.chemspider.com/Chemical-Structure.4450678.html 4450678]
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{{#set: in pathway=PWY-5329|PWY0-1534}}
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* CHEBI:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=12876 12876]
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation}}
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* METABOLIGHTS : MTBLC12876
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: smiles=C(=O)([O-])C=CC1(=CC=C(O)C=C1)}}
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{{#set: common name=4-coumarate}}
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{{#set: inchi key=InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M}}
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{{#set: molecular weight=163.152    }}
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{{#set: common name=4-hydroxycinnamate|4-hydroxycinnamic acid|p-coumarate|trans-4-hydroxycinnamate|p-coumaric acid|trans-p-hydroxycinnamate|trans-4-coumarate}}
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{{#set: consumed by=4-COUMARATE--COA-LIGASE-RXN}}
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{{#set: produced by=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN}}

Latest revision as of 20:05, 21 March 2018

Metabolite COUMARATE

  • smiles:
    • C(=O)([O-])C=CC1(=CC=C(O)C=C1)
  • common name:
    • 4-coumarate
  • inchi key:
    • InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M
  • molecular weight:
    • 163.152
  • Synonym(s):
    • 4-hydroxycinnamate
    • 4-hydroxycinnamic acid
    • p-coumarate
    • trans-4-hydroxycinnamate
    • p-coumaric acid
    • trans-p-hydroxycinnamate
    • trans-4-coumarate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 7400-08-0
  • PUBCHEM:
  • HMDB : HMDB02035
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC12876
"C(=O)([O-])C=CC1(=CC=C(O)C=C1)" cannot be used as a page name in this wiki.




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