Difference between revisions of "PWY-5768"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-517 RXN1G-517] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-517 RXN1G-517] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ketopantoate_hydroxymethyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/6.3.2.1 EC-6.3.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxylignoceroyl-ACPs]][c] '''=>''' 1 [[trans-delta2-lignoceroyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[L-PANTOATE]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PANTOTHENATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxylignoceroyl-[acp][c] '''=>''' 1 a trans-tetracos-2-enoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 (R)-pantoate[c] '''+''' 1 β-alanine[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 (R)-pantothenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6884]]
+
* [[Tiso_gene_14466]]
−
** EXPERIMENTAL_ANNOTATION
+
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
 +
* [[Tiso_gene_14465]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[athaliana]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10912 10912]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P31663 P31663]
 +
** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
 +
** [http://www.uniprot.org/uniprot/P56061 P56061]
 +
** [http://www.uniprot.org/uniprot/P57035 P57035]
 +
** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
 +
** [http://www.uniprot.org/uniprot/Q09673 Q09673]
 +
** [http://www.uniprot.org/uniprot/O24210 O24210]
 +
** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: common name=ketopantoate_hydroxymethyltransferase}}
−
{{#set: gene associated=Tiso_gene_6884}}
+
{{#set: ec number=EC-6.3.2.1}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: gene associated=Tiso_gene_14466|Tiso_gene_14465}}
 +
{{#set: in pathway=PANTO-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=athaliana}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:28, 10 January 2018

Reaction PANTOATE-BETA-ALANINE-LIG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ketopantoate_hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (R)-pantoate[c] + 1 β-alanine[c] + 1 ATP[c] => 1 H+[c] + 1 diphosphate[c] + 1 AMP[c] + 1 (R)-pantothenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PANTO-PWY, phosphopantothenate biosynthesis I: PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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