Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] == * direction: ** REVERSIBLE * ec number: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] == * direction: ** LEF...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** magnesium-protoporphyrin_o-methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 EC-6.4.1.3]
+
** [http://enzyme.expasy.org/EC/2.1.1.11 EC-2.1.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c]
+
** 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MG-PROTOPORPHYRIN-MONOMETHYL-ESTER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 propanoyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 (S)-methylmalonyl-CoA[c]
+
** 1 Mg-protoporphyrin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 magnesium-protoporphyrin IX 13-monomethyl ester[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_5029]]
+
* Gene: [[Tiso_gene_19451]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
+
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
−
** '''7''' reactions found over '''12''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
+
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
−
** '''8''' reactions found over '''16''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''11''' reactions found over '''18''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23720 23720]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17809 17809]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04237 R04237]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
+
** [http://www.uniprot.org/uniprot/P26162 P26162]
−
** [http://www.uniprot.org/uniprot/P07633 P07633]
+
** [http://www.uniprot.org/uniprot/Q9RFD7 Q9RFD7]
−
** [http://www.uniprot.org/uniprot/P05165 P05165]
+
** [http://www.uniprot.org/uniprot/Q9RFD5 Q9RFD5]
−
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
+
{{#set: common name=magnesium-protoporphyrin_o-methyltransferase}}
−
** [http://www.uniprot.org/uniprot/O24789 O24789]
+
{{#set: ec number=EC-2.1.1.11}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=Tiso_gene_19451}}
−
{{#set: ec number=EC-6.4.1.3}}
+
{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
−
{{#set: gene associated=Tiso_gene_5029}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: in pathway=PWY-5743|PWY-7384|PWY-5789|PROPIONMET-PWY|PWY-6728}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:06, 21 March 2018

Reaction RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • magnesium-protoporphyrin_o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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