Difference between revisions of "AMP"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12242 RXN-12242] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.3...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-L-fucose syntha...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| + | * common name: | ||
| + | ** GDP-L-fucose synthase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.1.1.271 EC-1.1.1.271] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13118]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 GDP-4-dehydro-α-D-rhamnose[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 GDP-β-L-fucose[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_16970]] |
| + | ** EXPERIMENTAL_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | ** [[pantograph]]-[[athaliana]] | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* [[orthology]]: | * [[orthology]]: | ||
** [[pantograph]]: | ** [[pantograph]]: | ||
*** [[esiliculosus]] | *** [[esiliculosus]] | ||
| + | *** [[athaliana]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[experimental_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: ec number=EC-1. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18885 18885] |
| − | {{#set: gene associated= | + | * LIGAND-RXN: |
| − | {{#set: in pathway=}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692] |
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=GDP-L-fucose synthase}} | ||
| + | {{#set: ec number=EC-1.1.1.271}} | ||
| + | {{#set: gene associated=Tiso_gene_16970}} | ||
| + | {{#set: in pathway=PWY-66}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | {{#set: reconstruction source=esiliculosus}} | + | {{#set: reconstruction source=esiliculosus|athaliana}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=experimental_annotation}} | ||
Revision as of 16:28, 10 January 2018
Contents
Reaction 1.1.1.271-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- GDP-L-fucose synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE[c] + 1 NADPH[c] + 1 PROTON[c] => 1 NADP[c] + 1 CPD-13118[c]
- With common name(s):
- 1 GDP-4-dehydro-α-D-rhamnose[c] + 1 NADPH[c] + 1 H+[c] => 1 NADP+[c] + 1 GDP-β-L-fucose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_16970
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-athaliana
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
Pathways
- PWY-66, GDP-L-fucose biosynthesis I (from GDP-D-mannose): PWY-66
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
External links
