Difference between revisions of "GDP-TP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-TP GDP-TP] == * smiles: ** C(OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])C1(OC(C(O)C(OP([O-])(...")
 
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[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-TP GDP-TP] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
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** C(OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])C1(OC(C(O)C(OP([O-])(=O)OP(O)([O-])=O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
 
* common name:
 
* common name:
** exosome_complex_exonuclease
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** pppGpp
* ec number:
+
* inchi key:
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
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** InChIKey=KCPMACXZAITQAX-UUOKFMHZSA-H
 +
* molecular weight:
 +
** 677.095   
 
* Synonym(s):
 
* Synonym(s):
 +
** guanosine pentaphosphate
 +
** guanosine 3'-diphosphate 5'-triphosphate
 +
** guanosine 5'-triphosphate,3'-diphosphate
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN0-6427]]
** n [[WATER]][c] '''+''' 1 [[RNASE-II-POLY-A-SUBSTRATE-MRNA]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[RNASE-II-SUBSTRATE-WITH-NO-POLY-A-TAIL]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
+
* [[GTPPYPHOSKIN-RXN]]
** n H2O[c] '''+''' 1 RNase II poly-A substrate mRNA[c] '''=>''' n AMP[c] '''+''' 1 RNase II substrate with no poly-A tail[c]
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== Reaction(s) of unknown directionality ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11612]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11613]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
+
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
{{#set: common name=exosome_complex_exonuclease}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04494 C04494]
{{#set: ec number=EC-3.1.13.1}}
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* HMDB : HMDB60480
{{#set: gene associated=Tiso_gene_11612|Tiso_gene_11613}}
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* CHEBI:
{{#set: in pathway=}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16690 16690]
{{#set: reconstruction category=annotation}}
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* BIGG : gdptp
{{#set: reconstruction source=annotation-in-silico_annotation}}
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* PUBCHEM:
{{#set: reconstruction tool=pathwaytools}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46173549 46173549]
 +
{{#set: smiles=C(OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])C1(OC(C(O)C(OP([O-])(=O)OP(O)([O-])=O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
 +
{{#set: common name=pppGpp}}
 +
{{#set: inchi key=InChIKey=KCPMACXZAITQAX-UUOKFMHZSA-H}}
 +
{{#set: molecular weight=677.095    }}
 +
{{#set: common name=guanosine pentaphosphate|guanosine 3'-diphosphate 5'-triphosphate|guanosine 5'-triphosphate,3'-diphosphate}}
 +
{{#set: consumed by=RXN0-6427}}
 +
{{#set: produced by=GTPPYPHOSKIN-RXN}}

Latest revision as of 20:06, 21 March 2018

Metabolite GDP-TP

  • smiles:
    • C(OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])C1(OC(C(O)C(OP([O-])(=O)OP(O)([O-])=O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
  • common name:
    • pppGpp
  • inchi key:
    • InChIKey=KCPMACXZAITQAX-UUOKFMHZSA-H
  • molecular weight:
    • 677.095
  • Synonym(s):
    • guanosine pentaphosphate
    • guanosine 3'-diphosphate 5'-triphosphate
    • guanosine 5'-triphosphate,3'-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])C1(OC(C(O)C(OP([O-])(=O)OP(O)([O-])=O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))" cannot be used as a page name in this wiki.