Difference between revisions of "RXN66-18"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-18 RXN66-18] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-18 RXN66-18] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** ORF
 
−
** phenylalanine_trna_synthtetase
 
−
** alpha_subunit_of_phenylalanyl-trna_synthetase
 
−
** ribosome_biogenesis_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.20 EC-6.1.1.20]
+
** [http://enzyme.expasy.org/EC/1.1.1.170 EC-1.1.1.170]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[PHE-tRNAs]][c] '''+''' 1 [[PHE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-PHE-tRNAs]][c]
+
** 1 [[CPD-8613]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CPD-8614]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAphe[c] '''+''' 1 L-phenylalanine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-phenylalanyl-[tRNAphe][c]
+
** 1 4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 4α-methyl-5α-cholesta-8-en-3-one[c] '''+''' 1 NAD(P)H[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_16467]]
+
* Gene: [[Tiso_gene_897]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_16650]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_1625]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_4232]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P94283 P94283]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDB4 Q9ZDB4]
 
−
** [http://www.uniprot.org/uniprot/Q9WZS9 Q9WZS9]
 
−
** [http://www.uniprot.org/uniprot/Q9PP34 Q9PP34]
 
−
** [http://www.uniprot.org/uniprot/P56145 P56145]
 
−
** [http://www.uniprot.org/uniprot/O67620 O67620]
 
−
** [http://www.uniprot.org/uniprot/O73984 O73984]
 
−
** [http://www.uniprot.org/uniprot/Q9Z6R6 Q9Z6R6]
 
−
** [http://www.uniprot.org/uniprot/Q58508 Q58508]
 
−
** [http://www.uniprot.org/uniprot/P56146 P56146]
 
−
** [http://www.uniprot.org/uniprot/O27545 O27545]
 
−
** [http://www.uniprot.org/uniprot/O26837 O26837]
 
−
** [http://www.uniprot.org/uniprot/O58391 O58391]
 
−
** [http://www.uniprot.org/uniprot/O83938 O83938]
 
−
** [http://www.uniprot.org/uniprot/P47436 P47436]
 
−
** [http://www.uniprot.org/uniprot/O67087 O67087]
 
−
** [http://www.uniprot.org/uniprot/O83059 O83059]
 
−
** [http://www.uniprot.org/uniprot/O84843 O84843]
 
−
** [http://www.uniprot.org/uniprot/Q9UYX3 Q9UYX3]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7W0 Q9Z7W0]
 
−
** [http://www.uniprot.org/uniprot/Q9PJR8 Q9PJR8]
 
−
** [http://www.uniprot.org/uniprot/P47437 P47437]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKF9 Q9ZKF9]
 
−
** [http://www.uniprot.org/uniprot/Q9UYX2 Q9UYX2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKF8 Q9ZKF8]
 
−
** [http://www.uniprot.org/uniprot/Q9JR76 Q9JR76]
 
−
** [http://www.uniprot.org/uniprot/Q57911 Q57911]
 
−
** [http://www.uniprot.org/uniprot/P43819 P43819]
 
−
** [http://www.uniprot.org/uniprot/P94282 P94282]
 
−
** [http://www.uniprot.org/uniprot/O84481 O84481]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDB5 Q9ZDB5]
 
−
** [http://www.uniprot.org/uniprot/Q9WZS8 Q9WZS8]
 
−
** [http://www.uniprot.org/uniprot/Q9RRX8 Q9RRX8]
 
−
** [http://www.uniprot.org/uniprot/Q9PP35 Q9PP35]
 
−
** [http://www.uniprot.org/uniprot/P43820 P43820]
 
−
** [http://www.uniprot.org/uniprot/Q46107 Q46107]
 
−
** [http://www.uniprot.org/uniprot/P15434 P15434]
 
−
** [http://www.uniprot.org/uniprot/Q5SGX1 Q5SGX1]
 
−
** [http://www.uniprot.org/uniprot/P37984 P37984]
 
−
** [http://www.uniprot.org/uniprot/P51346 P51346]
 
−
** [http://www.uniprot.org/uniprot/P75563 P75563]
 
−
** [http://www.uniprot.org/uniprot/P75564 P75564]
 
−
** [http://www.uniprot.org/uniprot/Q55187 Q55187]
 
−
** [http://www.uniprot.org/uniprot/P95960 P95960]
 
−
** [http://www.uniprot.org/uniprot/P95961 P95961]
 
−
** [http://www.uniprot.org/uniprot/Q49032 Q49032]
 
−
** [http://www.uniprot.org/uniprot/P08312 P08312]
 
−
** [http://www.uniprot.org/uniprot/P07395 P07395]
 
−
** [http://www.uniprot.org/uniprot/O42870 O42870]
 
−
** [http://www.uniprot.org/uniprot/O13432 O13432]
 
−
** [http://www.uniprot.org/uniprot/Q9GYS8 Q9GYS8]
 
−
** [http://www.uniprot.org/uniprot/O42849 O42849]
 
−
** [http://www.uniprot.org/uniprot/P17921 P17921]
 
−
** [http://www.uniprot.org/uniprot/P17922 P17922]
 
−
** [http://www.uniprot.org/uniprot/P15625 P15625]
 
−
** [http://www.uniprot.org/uniprot/P08425 P08425]
 
−
** [http://www.uniprot.org/uniprot/P15624 P15624]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.1.1.170}}
−
{{#set: common name=phenylalanine_trna_synthtetase}}
+
{{#set: gene associated=Tiso_gene_897}}
−
{{#set: common name=alpha_subunit_of_phenylalanyl-trna_synthetase}}
+
{{#set: in pathway=PWY66-3}}
−
{{#set: common name=ribosome_biogenesis_protein}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-6.1.1.20}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: gene associated=Tiso_gene_16467|Tiso_gene_16650|Tiso_gene_1625|Tiso_gene_4232}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:06, 21 March 2018

Reaction RXN66-18

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-3, cholesterol biosynthesis II (via 24,25-dihydrolanosterol): PWY66-3
    • 8 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-18&oldid=45996"