Difference between revisions of "Tiso gene 2812"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11521 RXN-11521] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Tiso_gene_2812 == * right end position: ** 15144 * transcription direction: ** NEGATIVE * left end position: ** 9027 * centisome position: ** 49.0891...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11521 RXN-11521] ==
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== Gene Tiso_gene_2812 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 15144
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* transcription direction:
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** NEGATIVE
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* left end position:
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** 9027
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* centisome position:
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** 49.08913   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[7-METHYLXANTHINE]][c] '''=>''' 1 [[CPD-12481]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[PCr]]
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** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 7-methylxanthine[c] '''=>''' 1 7-methylurate[c] '''+''' 1 hydrogen peroxide[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[PYRUVATE-CARBOXYLASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_11775]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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== Pathways associated ==
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P42-PWY]]
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== Reconstruction information  ==
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* [[PWY-7388]]
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* Category: [[orthology]]
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* [[PWY-6722]]
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** Source: [[orthology-athaliana]]
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* [[PWY-5743]]
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*** Tool: [[pantograph]]
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* [[PWY-6146]]
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* [[PWY-5744]]
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* [[PWY-6142]]
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* [[PWY66-399]]
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* [[PWY-5789]]
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* [[PWY-6679]]
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* [[PWY-5750]]
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* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=15144}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07979 R07979]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=9027}}
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{{#set: gene associated=Tiso_gene_11775}}
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{{#set: centisome position=49.08913    }}
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{{#set: in pathway=PWY-6632}}
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{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN|PCr|PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=P42-PWY|PWY-7388|PWY-6722|PWY-5743|PWY-6146|PWY-5744|PWY-6142|PWY66-399|PWY-5789|PWY-6679|PWY-5750|PWY-4381}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:07, 21 March 2018

Gene Tiso_gene_2812

  • right end position:
    • 15144
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 9027
  • centisome position:
    • 49.08913
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2812&oldid=46040"