Difference between revisions of "RXN-12750"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12750 RXN-12750] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-[(3aS,4S,5R,7aS)-5-hydrox...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12750 RXN-12750] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase
 +
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[PHE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-13757]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-13758]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 L-phenylalanine[c] '''+''' 1 2-oxoglutarate[c]
+
** 1 NAD+[c] '''+''' 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_13892]]
+
* Gene: [[Tiso_gene_14026]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_10680]]
+
* Gene: [[Tiso_gene_14027]]
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
** Source: [[orthology-creinhardtii]]
+
* Gene: [[Tiso_gene_18839]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-creinhardtii]]
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_15680]]
+
* Gene: [[Tiso_gene_14262]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5857]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_17809]]
+
* Gene: [[Tiso_gene_18838]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
* Gene: [[Tiso_gene_17718]]
+
*** Assignment: EC-NUMBER
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_13538]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_6815]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
** Source: [[orthology-creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
+
* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
+
{{#set: common name=3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase}}
−
* LIGAND-RXN:
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
* UNIPROT:
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
** [http://www.uniprot.org/uniprot/O84642 O84642]
+
{{#set: ec number=EC-1.1.1.35}}
−
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
+
{{#set: gene associated=Tiso_gene_14026|Tiso_gene_14027|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_18838}}
−
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
+
{{#set: in pathway=PWY-6944}}
−
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/O59096 O59096]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O58489 O58489]
+
−
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
+
−
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
+
−
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
+
−
** [http://www.uniprot.org/uniprot/P95468 P95468]
+
−
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
+
−
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
+
−
** [http://www.uniprot.org/uniprot/P74861 P74861]
+
−
** [http://www.uniprot.org/uniprot/P04693 P04693]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.6.1.57}}
+
−
{{#set: gene associated=Tiso_gene_13892|Tiso_gene_10680|Tiso_gene_15680|Tiso_gene_17809|Tiso_gene_17718|Tiso_gene_13538|Tiso_gene_6815}}
+
−
{{#set: in pathway=ANAPHENOXI-PWY|PWY-7432|PWY-5079|PHESYN}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:07, 21 March 2018

Reaction RXN-12750

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA[c] => 1 H+[c] + 1 NADH[c] + 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6944, androstenedione degradation: PWY-6944
    • 2 reactions found over 15 reactions in the full pathway

Reconstruction information

External links

"3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase" cannot be used as a page name in this wiki.





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12750&oldid=46155"