Difference between revisions of "RXN-12305"

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(Created page with "Category:Gene == Gene Tiso_gene_12778 == * right end position: ** 6172 * transcription direction: ** POSITIVE * left end position: ** 62 * centisome position: ** 0.9228937...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12305 RXN-12305] == * direction: ** LEFT-TO-RIGHT * common name: ** Probable 1,4-beta-D-glucan...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_12778 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12305 RXN-12305] ==
* right end position:
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* direction:
** 6172
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** Probable 1,4-beta-D-glucan cellobiohydrolase C
* left end position:
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* ec number:
** 62
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** [http://enzyme.expasy.org/EC/3.2.1.91 EC-3.2.1.91]
* centisome position:
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** 0.92289376   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[3-ISOPROPYLMALISOM-RXN]]
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* With identifiers:
** Source: [[annotation-in-silico_annotation]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-13205]][c] '''=>''' 2 [[CELLOBIOSE]][c]
*** Assignment: ec-number
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* With common name(s):
** Source: [[annotation-experimental_annotation]]
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** 1 H2O[c] '''+''' 1 cellotetraose[c] '''=>''' 2 β-D-cellobiose[c]
*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
* Reaction: [[HOMOACONITATE-HYDRATASE-RXN]]
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* Gene: [[Tiso_gene_2906]]
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-13163]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Assignment: ec-number
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*** Assignment: AUTOMATED-NAME-MATCH
* Reaction: [[RXN-13722]]
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== Pathways  ==
** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
* Reaction: [[RXN-8991]]
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* Category: [[annotation]]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-3081]]
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* [[LYSINE-AMINOAD-PWY]]
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* [[P241-PWY]]
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* [[LEUSYN-PWY]]
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* [[PWY-6871]]
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== External links  ==
 
== External links  ==
{{#set: right end position=6172}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Probable 1,4-beta-D-glucan cellobiohydrolase C}}
{{#set: left end position=62}}
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{{#set: ec number=EC-3.2.1.91}}
{{#set: centisome position=0.92289376    }}
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{{#set: gene associated=Tiso_gene_2906}}
{{#set: reaction associated=3-ISOPROPYLMALISOM-RXN|HOMOACONITATE-HYDRATASE-RXN|RXN-13163|RXN-13722|RXN-8991}}
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{{#set: in pathway=}}
{{#set: pathway associated=PWY-3081|LYSINE-AMINOAD-PWY|P241-PWY|LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:07, 21 March 2018

Reaction RXN-12305

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Probable 1,4-beta-D-glucan cellobiohydrolase C
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 cellotetraose[c] => 2 β-D-cellobiose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links