Difference between revisions of "RXN-5462"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13724 == * Synonym(s): == Reactions associated == * Reaction: RXN-8443 ** Source: orthology-athaliana == Pathways associated == *...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] == * direction: ** LEFT-TO-RIGHT * common name: ** vacuolar_protein_sorting-asso...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** vacuolar_protein_sorting-associated_protein_51_homolog | ||
+ | ** ORF | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.4.1.132 EC-2.4.1.132] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * | + | * With identifiers: |
− | ** Source: [[orthology- | + | ** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[CPD-5161]][c] |
− | == Pathways | + | * With common name(s): |
− | * [[ | + | ** 1 GDP-α-D-mannose[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 GDP[c] '''+''' 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_16872]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_10734]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | == Pathways == | ||
+ | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS] | ||
+ | ** '''19''' reactions found over '''19''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29518 29518] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05973 R05973] | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05002 R05002] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=vacuolar_protein_sorting-associated_protein_51_homolog}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: ec number=EC-2.4.1.132}} | ||
+ | {{#set: gene associated=Tiso_gene_16872|Tiso_gene_10734}} | ||
+ | {{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 20:08, 21 March 2018
Contents
Reaction RXN-5462
- direction:
- LEFT-TO-RIGHT
- common name:
- vacuolar_protein_sorting-associated_protein_51_homolog
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GDP-MANNOSE[c] + 1 ALPHA-D-MANNOSYLCHITOBIO[c] => 1 PROTON[c] + 1 GDP[c] + 1 CPD-5161[c]
- With common name(s):
- 1 GDP-α-D-mannose[c] + 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 H+[c] + 1 GDP[c] + 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_16872
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_10734
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS, protein N-glycosylation (eukaryotic, high mannose): MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
- 19 reactions found over 19 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links