|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == | + | == Gene Tiso_gene_9109 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.1.1.23 EC-4.1.1.23]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[RXN-11046]] |
| − | ** 1 [[PROTON]][c] '''+''' 1 [[OROTIDINE-5-PHOSPHATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UMP]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 H+[c] '''+''' 1 orotidine 5'-phosphate[c] '''=>''' 1 CO2[c] '''+''' 1 UMP[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_20050]] | + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | * Gene: [[Tiso_gene_18647]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | == Pathways ==
| + | * Reaction: [[RXN-14177]] |
| − | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] | + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
| + | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
| + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| | ** Source: [[orthology-athaliana]] | | ** Source: [[orthology-athaliana]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=RXN-11046|RXN-14177}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11172 P11172]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9KQT7 Q9KQT7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CFW9 Q9CFW9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24220 P24220]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A5M7 P0A5M7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43812 P43812]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PIC1 Q9PIC1]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P10652 P10652]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07817 P07817]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P03962 P03962]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P14017 P14017]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07691 P07691]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P08244 P08244]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13439 P13439]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05035 P05035]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P09463 P09463]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P14964 P14964]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21593 P21593]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P15188 P15188]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07922 P07922]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A5M6 P0A5M6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JV18 Q9JV18]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25971 P25971]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46535 P46535]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P31754 P31754]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32430 P32430]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q01637 Q01637]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P09556 P09556]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21594 P21594]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q06375 Q06375]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41769 P41769]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q18516 Q18516]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q59654 Q59654]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42586 Q42586]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P48844 P48844]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43230 P43230]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42942 Q42942]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O74110 O74110]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: ec number=EC-4.1.1.23}}
| + | |
| − | {{#set: gene associated=Tiso_gene_20050|Tiso_gene_18647}}
| + | |
| − | {{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus|manual-primary_network}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
