Difference between revisions of "3.5.1.27-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1050 RXN1G-1050] == * direction: ** LEFT-TO-RIGHT * common name: ** cis,cis-delta13,31-3-oxo-...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** polypeptide_deformylase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[Charged-fMET-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''+''' 1 H2O[c] '''=>''' 1 a L-methionylaminoacyl-tRNA[c] '''+''' 1 H+[c] '''+''' 1 formate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_14998]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P44786 P44786] | ||
| + | ** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=polypeptide_deformylase}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-3.5.1.88}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_14998}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 20:10, 21 March 2018
Contents
Reaction 3.5.1.27-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- polypeptide_deformylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Charged-fMET-tRNAs[c] + 1 WATER[c] => 1 L-Methionylaminoacyl-tRNAs[c] + 1 PROTON[c] + 1 FORMATE[c]
- With common name(s):
- 1 an N-formyl-L-methionylaminoacyl-tRNA[c] + 1 H2O[c] => 1 a L-methionylaminoacyl-tRNA[c] + 1 H+[c] + 1 formate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_14998
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
