Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] == * direction: ** LEFT-TO-RIGHT * common name: ** thiamin phosphate synthase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** thiamin phosphate synthase
+
−
** ORF
+
−
** thiamine_monophosphate_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
+
** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13575]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[THIAMINE-P]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 thiamine phosphate[c] '''+''' 1 diphosphate[c]
+
** 1 O-succinyl-L-homoserine[c] '''+''' 1 L-cysteine[c] '''<=>''' 1 H+[c] '''+''' 1 L-cystathionine[c] '''+''' 1 succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_2159]]
+
* Gene: [[Tiso_gene_3732]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_2160]]
+
** Source: [[orthology-creinhardtii]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_10320]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6894]], thiamine diphosphate biosynthesis I (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894]
+
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=thiamin phosphate synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
−
{{#set: common name=ORF}}
+
* LIGAND-RXN:
−
{{#set: common name=thiamine_monophosphate_synthase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
−
{{#set: ec number=EC-2.5.1.3}}
+
* UNIPROT:
−
{{#set: gene associated=Tiso_gene_2159|Tiso_gene_2160|Tiso_gene_10320}}
+
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
−
{{#set: in pathway=PWY-6894}}
+
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P38675 P38675]
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/P24601 P24601]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P00935 P00935]
 +
** [http://www.uniprot.org/uniprot/O04981 O04981]
 +
** [http://www.uniprot.org/uniprot/O04982 O04982]
 +
** [http://www.uniprot.org/uniprot/O81334 O81334]
 +
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.5.1.48}}
 +
{{#set: gene associated=Tiso_gene_3732}}
 +
{{#set: in pathway=PWY-I9|HOMOSER-METSYN-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:10, 21 March 2018

Reaction O-SUCCHOMOSERLYASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 5 reactions found over 7 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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