Difference between revisions of "SPMDtmi"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRTRANS-RXN PRTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** anthranilate * ec number:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPMDtmi SPMDtmi] == * direction: ** LEFT-TO-RIGHT * common name: ** spermidine:proton symporter (ir...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRTRANS-RXN PRTRANS-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPMDtmi SPMDtmi] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** anthranilate
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** spermidine:proton symporter (irreversible), mitochondria
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.4.2.18 EC-2.4.2.18]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[ANTHRANILATE]][c] '''+''' 1 [[PRPP]][c]
+
** 1.0 [[SPERMIDINE]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[SPERMIDINE]][m] '''+''' 1.0 [[PROTON]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 N-(5-phosphoribosyl)-anthranilate[c] '''+''' 1 diphosphate[c] '''<=>''' 1 anthranilate[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
+
** 1.0 spermidine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 spermidine[m] '''+''' 1.0 H+[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_15839]]
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* Gene: [[Tiso_gene_10958]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: EC-NUMBER
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−
** Source: [[orthology-athaliana]]
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−
** Source: [[orthology-synechocystis]]
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−
** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11768 11768]
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{{#set: common name=spermidine:proton symporter (irreversible), mitochondria}}
−
* LIGAND-RXN:
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{{#set: gene associated=Tiso_gene_10958}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01073 R01073]
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{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P12320 P12320]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/P12321 P12321]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P42392 P42392]
+
−
** [http://www.uniprot.org/uniprot/P66995 P66995]
+
−
** [http://www.uniprot.org/uniprot/P20574 P20574]
+
−
** [http://www.uniprot.org/uniprot/P20575 P20575]
+
−
** [http://www.uniprot.org/uniprot/Q08654 Q08654]
+
−
** [http://www.uniprot.org/uniprot/P06559 P06559]
+
−
** [http://www.uniprot.org/uniprot/P43858 P43858]
+
−
** [http://www.uniprot.org/uniprot/P56737 P56737]
+
−
** [http://www.uniprot.org/uniprot/P18261 P18261]
+
−
** [http://www.uniprot.org/uniprot/P17170 P17170]
+
−
** [http://www.uniprot.org/uniprot/P00906 P00906]
+
−
** [http://www.uniprot.org/uniprot/P00905 P00905]
+
−
** [http://www.uniprot.org/uniprot/P00904 P00904]
+
−
** [http://www.uniprot.org/uniprot/P03947 P03947]
+
−
** [http://www.uniprot.org/uniprot/P07285 P07285]
+
−
** [http://www.uniprot.org/uniprot/P00500 P00500]
+
−
** [http://www.uniprot.org/uniprot/P26924 P26924]
+
−
** [http://www.uniprot.org/uniprot/P30525 P30525]
+
−
** [http://www.uniprot.org/uniprot/Q02000 Q02000]
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−
** [http://www.uniprot.org/uniprot/P73617 P73617]
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−
** [http://www.uniprot.org/uniprot/O80558 O80558]
+
−
** [http://www.uniprot.org/uniprot/O65279 O65279]
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−
** [http://www.uniprot.org/uniprot/Q9T0C8 Q9T0C8]
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−
** [http://www.uniprot.org/uniprot/O49435 O49435]
+
−
** [http://www.uniprot.org/uniprot/Q43085 Q43085]
+
−
** [http://www.uniprot.org/uniprot/O68608 O68608]
+
−
** [http://www.uniprot.org/uniprot/Q9S592 Q9S592]
+
−
** [http://www.uniprot.org/uniprot/Q9ZFA8 Q9ZFA8]
+
−
** [http://www.uniprot.org/uniprot/P94326 P94326]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=anthranilate}}
+
−
{{#set: ec number=EC-2.4.2.18}}
+
−
{{#set: gene associated=Tiso_gene_15839}}
+
−
{{#set: in pathway=TRPSYN-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:11, 21 March 2018

Reaction SPMDtmi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • spermidine:proton symporter (irreversible), mitochondria
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 spermidine[c] + 1.0 H+[c] => 1.0 spermidine[m] + 1.0 H+[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SPMDtmi&oldid=46637"