Difference between revisions of "SULFOCYS-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_14456 == * right end position: ** 4528 * transcription direction: ** NEGATIVE * left end position: ** 717 * centisome position: ** 12.70150...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFOCYS-RXN SULFOCYS-RXN] == * direction: ** REVERSIBLE * common name: ** cog0031:_cysteine_syntha...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_14456 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFOCYS-RXN SULFOCYS-RXN] ==
−
* right end position:
+
* direction:
−
** 4528
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** cog0031:_cysteine_synthase
−
* left end position:
+
** cysteine_synthase
−
** 717
+
** cysteine
−
* centisome position:
+
* ec number:
−
** 12.701506   
+
** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[3.4.11.9-RXN]]
+
* With identifiers:
 +
** 1 [[S2O3]][c] '''+''' 1 [[ACETYLSERINE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[SULFO-CYSTEINE]][c]
 +
* With common name(s):
 +
** 1 thiosulfate[c] '''+''' 1 O-acetyl-L-serine[c] '''<=>''' 1 H+[c] '''+''' 1 acetate[c] '''+''' 1 S-sulfo-L-cysteine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_2283]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17043]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Assignment: automated-name-match
+
*** Assignment: EC-NUMBER
−
* Reaction: [[CREATINASE-RXN]]
+
* Gene: [[Tiso_gene_6110]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
** Source: [[orthology-creinhardtii]]
−
* [[CRNFORCAT-PWY]]
+
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_3732]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_7852]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_819]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12184]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=4528}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30891 30891]
−
{{#set: left end position=717}}
+
* LIGAND-RXN:
−
{{#set: centisome position=12.701506    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03132 R03132]
−
{{#set: reaction associated=3.4.11.9-RXN|CREATINASE-RXN}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: pathway associated=CRNFORCAT-PWY}}
+
{{#set: common name=cog0031:_cysteine_synthase}}
 +
{{#set: common name=cysteine_synthase}}
 +
{{#set: common name=cysteine}}
 +
{{#set: ec number=EC-2.5.1.47}}
 +
{{#set: gene associated=Tiso_gene_2283|Tiso_gene_17043|Tiso_gene_6110|Tiso_gene_3732|Tiso_gene_7852|Tiso_gene_819|Tiso_gene_12184}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction SULFOCYS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • cog0031:_cysteine_synthase
    • cysteine_synthase
    • cysteine
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 thiosulfate[c] + 1 O-acetyl-L-serine[c] <=> 1 H+[c] + 1 acetate[c] + 1 S-sulfo-L-cysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SULFOCYS-RXN&oldid=46766"