Difference between revisions of "R-3-Hydroxypalmitoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ORF ** at1g17160 ** ribokinase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** ORF
+
−
** at1g17160
+
−
** ribokinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
+
** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-DEOXYRIBOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PALMITYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2'-deoxyribose[c] '''+''' 1 ATP[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 palmitoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7682]]
+
* [[Tiso_gene_801]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_82]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17974]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_911]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_81]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18204]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
 +
** '''3''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[esiliculosus]]
+
*** [[creinhardtii]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16645 16645]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01274 R01274]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=ORF}}
+
** [http://www.uniprot.org/uniprot/Q64559 Q64559]
−
{{#set: common name=at1g17160}}
+
** [http://www.uniprot.org/uniprot/O14734 O14734]
−
{{#set: common name=ribokinase}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.1.15}}
+
{{#set: ec number=EC-3.1.2.2}}
−
{{#set: gene associated=Tiso_gene_7682|Tiso_gene_82|Tiso_gene_17974|Tiso_gene_911|Tiso_gene_81|Tiso_gene_18204}}
+
{{#set: gene associated=Tiso_gene_801}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-321|PWY-1121|PWY-6733|PWY-5994}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:30, 10 January 2018

Reaction PALMITOYL-COA-HYDROLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitoyl-CoA[c] + 1 H2O[c] => 1 palmitate[c] + 1 H+[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-321, cutin biosynthesis: PWY-321
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links






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