Difference between revisions of "3-OXOACYL-ACP-REDUCT-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_11824 == * right end position: ** 6117 * transcription direction: ** NEGATIVE * left end position: ** 3821 * centisome position: ** 50.9942...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** polyketide_synthase |
− | * | + | ** 3-oxoacyl-(acyl-carrier-protein) |
− | ** | + | * ec number: |
− | * | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] |
− | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] |
+ | ** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * | + | * With identifiers: |
+ | ** 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[OH-ACYL-ACP]][c] '''+''' 1 [[NADP]][c] | ||
+ | * With common name(s): | ||
+ | ** 1 a 3-oxoacyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] '''+''' 1 NADP+[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_9885]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_13394]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_13083]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_135]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_10876]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_500]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_136]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
− | *** | + | *** Tool: [[pathwaytools]] |
− | + | ** Source: [[annotation-experimental_annotation]] | |
− | * [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02767 R02767] |
− | {{#set: | + | * UNIPROT: |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P49327 P49327] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O25286 O25286] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P51831 P51831] |
+ | ** [http://www.uniprot.org/uniprot/Q9PI70 Q9PI70] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AEK2 P0AEK2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLS0 Q9ZLS0] | ||
+ | ** [http://www.uniprot.org/uniprot/P43713 P43713] | ||
+ | ** [http://www.uniprot.org/uniprot/P14802 P14802] | ||
+ | ** [http://www.uniprot.org/uniprot/O32229 O32229] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW61 Q9JW61] | ||
+ | ** [http://www.uniprot.org/uniprot/O34782 O34782] | ||
+ | ** [http://www.uniprot.org/uniprot/O67610 O67610] | ||
+ | ** [http://www.uniprot.org/uniprot/P27583 P27583] | ||
+ | ** [http://www.uniprot.org/uniprot/P33207 P33207] | ||
+ | ** [http://www.uniprot.org/uniprot/P27582 P27582] | ||
+ | ** [http://www.uniprot.org/uniprot/P28643 P28643] | ||
+ | ** [http://www.uniprot.org/uniprot/P73574 P73574] | ||
+ | ** [http://www.uniprot.org/uniprot/O54438 O54438] | ||
+ | ** [http://www.uniprot.org/uniprot/P55336 P55336] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RA33 Q9RA33] | ||
+ | ** [http://www.uniprot.org/uniprot/Q44326 Q44326] | ||
+ | ** [http://www.uniprot.org/uniprot/P12276 P12276] | ||
+ | ** [http://www.uniprot.org/uniprot/P12785 P12785] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=polyketide_synthase}} | ||
+ | {{#set: common name=3-oxoacyl-(acyl-carrier-protein)}} | ||
+ | {{#set: ec number=EC-2.3.1.86}} | ||
+ | {{#set: ec number=EC-2.3.1.85}} | ||
+ | {{#set: ec number=EC-1.1.1.100}} | ||
+ | {{#set: gene associated=Tiso_gene_9885|Tiso_gene_13394|Tiso_gene_13083|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_136}} | ||
+ | {{#set: in pathway=FASYN-ELONG-PWY}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 20:15, 21 March 2018
Contents
Reaction 3-OXOACYL-ACP-REDUCT-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- 3-oxoacyl-(acyl-carrier-protein)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 B-KETOACYL-ACP[c] + 1 NADPH[c] + 1 PROTON[c] => 1 OH-ACYL-ACP[c] + 1 NADP[c]
- With common name(s):
- 1 a 3-oxoacyl-[acp][c] + 1 NADPH[c] + 1 H+[c] => 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_9885
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_13394
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13083
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_135
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_10876
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_500
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_136
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- FASYN-ELONG-PWY, fatty acid elongation -- saturated: FASYN-ELONG-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
- UNIPROT: