Difference between revisions of "RETINAL"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-ASPARTATE-OXID-RXN L-ASPARTATE-OXID-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] == * smiles: ** CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O * common name: **...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-ASPARTATE-OXID-RXN L-ASPARTATE-OXID-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.4.3.16 EC-1.4.3.16]
+
** all-trans-retinal
 +
* inchi key:
 +
** InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N
 +
* molecular weight:
 +
** 284.441   
 
* Synonym(s):
 
* Synonym(s):
 +
** vitamin A aldehyde
 +
** retinene
 +
** axerophthal
 +
** retinaldehyde
 +
** retinal
 +
** all-trans-Vitamin A aldehyde
 +
** all-trans-retinene
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[IMINOASPARTATE]][c]
+
* [[RXN-13374]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 oxygen[c] '''+''' 1 L-aspartate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''+''' 1 2-iminosuccinate[c]
+
* [[RETINOL-DEHYDROGENASE-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_7285]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
+
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 116-31-4
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25876 25876]
+
* LIPID_MAPS : LMPR01090002
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00481 R00481]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=638015 638015]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00357 R00357]
+
* HMDB : HMDB01358
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-CPD:
−
{{#set: ec number=EC-1.4.3.16}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00376 C00376]
−
{{#set: gene associated=Tiso_gene_7285}}
+
* CHEMSPIDER:
−
{{#set: in pathway=PWY-5316|PWY-7342|PYRIDNUCSYN-PWY}}
+
** [http://www.chemspider.com/Chemical-Structure.553582.html 553582]
−
{{#set: reconstruction category=orthology}}
+
* CHEBI:
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17898 17898]
−
{{#set: reconstruction tool=pantograph}}
+
* METABOLIGHTS : MTBLC17898
 +
{{#set: smiles=CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O}}
 +
{{#set: common name=all-trans-retinal}}
 +
{{#set: inchi key=InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N}}
 +
{{#set: molecular weight=284.441    }}
 +
{{#set: common name=vitamin A aldehyde|retinene|axerophthal|retinaldehyde|retinal|all-trans-Vitamin A aldehyde|all-trans-retinene}}
 +
{{#set: produced by=RXN-13374}}
 +
{{#set: reversible reaction associated=RETINOL-DEHYDROGENASE-RXN}}

Latest revision as of 21:16, 21 March 2018

Metabolite RETINAL

  • smiles:
    • CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O
  • common name:
    • all-trans-retinal
  • inchi key:
    • InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N
  • molecular weight:
    • 284.441
  • Synonym(s):
    • vitamin A aldehyde
    • retinene
    • axerophthal
    • retinaldehyde
    • retinal
    • all-trans-Vitamin A aldehyde
    • all-trans-retinene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 116-31-4
  • LIPID_MAPS : LMPR01090002
  • PUBCHEM:
  • HMDB : HMDB01358
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17898
"CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RETINAL&oldid=47397"