Difference between revisions of "RXN-10815"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_829 == * right end position: ** 27885 * transcription direction: ** POSITIVE * left end position: ** 21934 * centisome position: ** 76.7916...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo-3-phenylpropanoate di...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** 2-oxo-3-phenylpropanoate dioxygenase |
| − | * | + | ** ORF |
| − | ** | + | ** 4-hydroxyphenylpyruvate_dioxygenase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27] |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''=>''' 1 [[CPD-11495]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 oxygen[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''=>''' 1 2-hydroxyphenylacetate[c] '''+''' 1 CO2[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_18328]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| + | ** Source: [[orthology-athaliana]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
| − | * | + | * Gene: [[Tiso_gene_18976]] |
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| − | * | + | * Gene: [[Tiso_gene_18977]] |
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| − | * | + | ** Source: [[orthology-athaliana]] |
| − | ** Source: [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | *** | + | == Pathways == |
| − | * | + | * [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] |
| − | ** Source: [[ | + | ** '''4''' reactions found over '''9''' reactions in the full pathway |
| − | *** | + | == Reconstruction information == |
| − | * | + | * Category: [[orthology]] |
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31107 31107] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: pathway | + | {{#set: common name=2-oxo-3-phenylpropanoate dioxygenase}} |
| + | {{#set: common name=ORF}} | ||
| + | {{#set: common name=4-hydroxyphenylpyruvate_dioxygenase}} | ||
| + | {{#set: ec number=EC-1.13.11.27}} | ||
| + | {{#set: gene associated=Tiso_gene_18328|Tiso_gene_18976|Tiso_gene_18977}} | ||
| + | {{#set: in pathway=PWY-6318}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:17, 21 March 2018
Contents
Reaction RXN-10815
- direction:
- LEFT-TO-RIGHT
- common name:
- 2-oxo-3-phenylpropanoate dioxygenase
- ORF
- 4-hydroxyphenylpyruvate_dioxygenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 OXYGEN-MOLECULE[c] + 1 PHENYL-PYRUVATE[c] => 1 CPD-11495[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 oxygen[c] + 1 2-oxo-3-phenylpropanoate[c] => 1 2-hydroxyphenylacetate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_18328
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18976
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18977
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain): PWY-6318
- 4 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
