Difference between revisions of "RXN-7968"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13367 == * right end position: ** 2108 * transcription direction: ** POSITIVE * left end position: ** 478 * centisome position: ** 7.531117...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7968 RXN-7968] == * direction: ** LEFT-TO-RIGHT * common name: ** pentafunctional_protein * ec...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7968 RXN-7968] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** pentafunctional_protein |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.1.1.282 EC-1.1.1.282] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[SHIKIMATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 shikimate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 H+[c] '''+''' 1 3-dehydroshikimate[c] '''+''' 1 NAD(P)H[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_5752]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5753]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| − | * | + | ** Source: [[orthology-esiliculosus]] |
| + | == Pathways == | ||
| + | * [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17744 17744] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=pentafunctional_protein}} |
| − | {{#set: | + | {{#set: ec number=EC-1.1.1.282}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_5752|Tiso_gene_5753}} |
| + | {{#set: in pathway=PWY-6163}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:17, 21 March 2018
Contents
Reaction RXN-7968
- direction:
- LEFT-TO-RIGHT
- common name:
- pentafunctional_protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 SHIKIMATE[c] + 1 NAD-P-OR-NOP[c] => 1 PROTON[c] + 1 3-DEHYDRO-SHIKIMATE[c] + 1 NADH-P-OR-NOP[c]
- With common name(s):
- 1 shikimate[c] + 1 NAD(P)+[c] => 1 H+[c] + 1 3-dehydroshikimate[c] + 1 NAD(P)H[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5752
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5753
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
