Difference between revisions of "PPGPPSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12541 RXN-12541] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-l...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** ca2+-activated_spot-like_protein | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 1 [[WATER]][c] '''+''' 1 [[GUANOSINE-5DP-3DP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 H2O[c] '''+''' 1 ppGpp[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 GDP[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_6799]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 20: | Line 28: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00336 R00336] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PN26 Q9PN26] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JT97 Q9JT97] | ||
| + | ** [http://www.uniprot.org/uniprot/P43811 P43811] | ||
| + | ** [http://www.uniprot.org/uniprot/P0AG24 P0AG24] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: in pathway= | + | {{#set: common name=ca2+-activated_spot-like_protein}} |
| + | {{#set: ec number=EC-3.1.7.2}} | ||
| + | {{#set: gene associated=Tiso_gene_6799}} | ||
| + | {{#set: in pathway=PPGPPMET-PWY}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-in-silico_annotation}} | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:17, 21 March 2018
Contents
Reaction PPGPPSYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ca2+-activated_spot-like_protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 GUANOSINE-5DP-3DP[c] => 1 PPI[c] + 1 PROTON[c] + 1 GDP[c]
- With common name(s):
- 1 H2O[c] + 1 ppGpp[c] => 1 diphosphate[c] + 1 H+[c] + 1 GDP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6799
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PPGPPMET-PWY, ppGpp biosynthesis: PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
