Difference between revisions of "Tiso gene 13809"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15881 RXN-15881] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_desulfurase_for_ir...")
(Created page with "Category:Gene == Gene Tiso_gene_13809 == * right end position: ** 5206 * transcription direction: ** NEGATIVE * left end position: ** 218 * centisome position: ** 3.605689...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15881 RXN-15881] ==
+
== Gene Tiso_gene_13809 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5206
−
* common name:
+
* transcription direction:
−
** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
+
** NEGATIVE
−
** cysteine_mitochondrial
+
* left end position:
−
* ec number:
+
** 218
−
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
+
* centisome position:
 +
** 3.6056898   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ASPARTATEKIN-RXN]]
−
** 1 [[CYS]][c] '''+''' 1 [[L-Cysteine-Desulfurases]][c] '''=>''' 1 [[Persulfurated-L-cysteine-desulfurases]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
+
−
* With common name(s):
+
−
** 1 L-cysteine[c] '''+''' 1 an [L-cysteine desulfurase][c] '''=>''' 1 an S-sulfanyl-[L-cysteine desulfurase][c] '''+''' 1 L-alanine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_11478]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_14710]]
+
** Source: [[orthology-creinhardtii]]
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways associated ==
−
*** Assignment: EC-NUMBER
+
* [[HOMOSERSYN-PWY]]
−
** Source: [[orthology-esiliculosus]]
+
* [[PWY-7153]]
−
* Gene: [[Tiso_gene_4284]]
+
* [[DAPLYSINESYN-PWY]]
−
** Source: [[annotation-in-silico_annotation]]
+
* [[PWY-2942]]
−
*** Assignment: EC-NUMBER
+
* [[PWY-2941]]
−
** Source: [[annotation-experimental_annotation]]
+
* [[PWY-6559]]
−
*** Assignment: EC-NUMBER
+
* [[PWY-5097]]
−
** Source: [[orthology-esiliculosus]]
+
* [[PWY-6562]]
−
== Pathways ==
+
* [[P101-PWY]]
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=5206}}
−
{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=cysteine_mitochondrial}}
+
{{#set: left end position=218}}
−
{{#set: ec number=EC-2.8.1.7}}
+
{{#set: centisome position=3.6056898    }}
−
{{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}}
+
{{#set: reaction associated=ASPARTATEKIN-RXN}}
−
{{#set: in pathway=PWY-7250}}
+
{{#set: pathway associated=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_13809

  • right end position:
    • 5206
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 218
  • centisome position:
    • 3.6056898
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13809&oldid=47475"