Difference between revisions of "RXN-17897"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R468-RXN R468-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanuric_acid_amidohydrolase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin--nadp_root_isozy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R468-RXN R468-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17897 RXN-17897] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cyanuric_acid_amidohydrolase
+
** ferredoxin--nadp_root_isozyme_chloroplastic
 +
** ferredoxin--nadp_embryochloroplastic
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.2.15 EC-3.5.2.15]
+
** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYANURIC-ACID]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-809]][c]
+
** 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 cyanurate[c] '''+''' 1 H2O[c] '''=>''' 1 CO2[c] '''+''' 1 biuret[c]
+
** 1 NADPH[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_9325]]
+
* Gene: [[Tiso_gene_20054]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17381]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_20168]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_19031]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_20055]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_17170]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 23: Line 44:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5169]], cyanurate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5169 PWY-5169]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14641 14641]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07305 R07305]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cyanuric_acid_amidohydrolase}}
+
{{#set: common name=ferredoxin--nadp_root_isozyme_chloroplastic}}
−
{{#set: ec number=EC-3.5.2.15}}
+
{{#set: common name=ferredoxin--nadp_embryochloroplastic}}
−
{{#set: gene associated=Tiso_gene_9325}}
+
{{#set: ec number=EC-1.18.1.2}}
−
{{#set: in pathway=PWY-5169}}
+
{{#set: gene associated=Tiso_gene_20054|Tiso_gene_17381|Tiso_gene_20168|Tiso_gene_19031|Tiso_gene_20055|Tiso_gene_17170}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:17, 21 March 2018

Reaction RXN-17897

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin--nadp_root_isozyme_chloroplastic
    • ferredoxin--nadp_embryochloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17897&oldid=47560"