Difference between revisions of "PGLYCDEHYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5162 CPD-5162] == * common name: ** α-D-Man-(1→3)-[α-D-Man-(1→6)]-&al...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** d-3-phosphogly...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5162 CPD-5162] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol
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** d-3-phosphoglycerate_dehydrogenase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
 
* Synonym(s):
 
* Synonym(s):
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** α-D-mannosyl-(1→3)-[α-D-mannosyl-(1→6)]-α-D-mannosyl-(1→4)-N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol
 
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** a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-5464]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c]
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* [[RXN-5463]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 3-phospho-D-glycerate[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6223]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6224]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17123]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15687]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_15686]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18904]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol}}
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* RHEA:
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{{#set: common name=&alpha;-D-mannosyl-(1&rarr;3)-[&alpha;-D-mannosyl-(1&rarr;6)]-&alpha;-D-mannosyl-(1&rarr;4)-N-acetyl-&beta;-D-glucosaminyl-(1&rarr;4)-N-acetyl-&alpha;-D-glucosaminyl-diphosphodolichol|a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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{{#set: consumed by=RXN-5464}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-5463}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=d-3-phosphoglycerate_dehydrogenase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.95}}
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{{#set: gene associated=Tiso_gene_6223|Tiso_gene_6224|Tiso_gene_17123|Tiso_gene_15687|Tiso_gene_15686|Tiso_gene_18904}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:18, 21 March 2018

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • d-3-phosphoglycerate_dehydrogenase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-phospho-D-glycerate[c] + 1 NAD+[c] <=> 1 H+[c] + 1 3-phospho-hydroxypyruvate[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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