Difference between revisions of "RXN-10698"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Oxidized-ferredoxins Oxidized-ferredoxins] == * common name: ** an oxidized ferredoxin [iron-su...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Oxidized-ferredoxins Oxidized-ferredoxins] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** an oxidized ferredoxin [iron-sulfur] cluster
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** 3-hydroxyacyl-_dehydrogenase
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** hydroxyacyl-coenzyme_a_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** an oxidized ferredoxin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12878]]
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* With identifiers:
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* [[RXN-15468]]
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** 1 [[CPD-11519]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11520]][c]
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* [[RXN-17897]]
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* With common name(s):
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* [[GCLDH]]
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** 1 OPC8-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c]
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== Reaction(s) known to produce the compound ==
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-7979]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[1.3.7.4-RXN]]
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* Gene: [[Tiso_gene_14026]]
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* [[FNorh]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-7903]]
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*** Assignment: EC-NUMBER
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* [[RXN-7741]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-8389]]
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*** Assignment: EC-NUMBER
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* [[RXN0-882]]
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** Source: [[orthology-esiliculosus]]
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* [[SULFITE-REDUCTASE-FERREDOXIN-RXN]]
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* Gene: [[Tiso_gene_14027]]
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* [[RXN-13193]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN-5061]]
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* Gene: [[Tiso_gene_5857]]
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* [[RXN-7978]]
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** Source: [[annotation-in-silico_annotation]]
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* [[1.3.7.3-RXN]]
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*** Assignment: EC-NUMBER
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* [[RXN0-884]]
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** Source: [[annotation-experimental_annotation]]
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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*** Assignment: EC-NUMBER
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* [[1.18.1.2-RXN]]
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** Source: [[orthology-esiliculosus]]
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* [[ISPH2-RXN]]
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* Gene: [[Tiso_gene_18839]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-in-silico_annotation]]
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* [[HYDROG-RXN]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18838]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=an oxidized ferredoxin [iron-sulfur] cluster}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=an oxidized ferredoxin}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: consumed by=RXN-12878|RXN-15468|RXN-17897|GCLDH}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: produced by=FERREDOXIN--NITRITE-REDUCTASE-RXN|RXN-7979|1.3.7.4-RXN|FNorh|RXN-7903|RXN-7741|RXN-8389|RXN0-882|SULFITE-REDUCTASE-FERREDOXIN-RXN|RXN-13193|RXN-5061|RXN-7978|1.3.7.3-RXN|RXN0-884|GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|1.18.1.2-RXN|ISPH2-RXN}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: reversible reaction associated=HYDROG-RXN}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Tiso_gene_14026|Tiso_gene_14027|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_18838}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:18, 21 March 2018

Reaction RXN-10698

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 OPC8-3-hydroxyacyl-CoA[c] + 1 NAD+[c] => 1 NADH[c] + 1 H+[c] + 1 OPC8-3-ketoacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10698&oldid=47592"