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| [[Category:Reaction]] | | [[Category:Reaction]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16ALDOLASE-RXN F16ALDOLASE-RXN] == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7922 RXN-7922] == |
| * direction: | | * direction: |
− | ** REVERSIBLE | + | ** LEFT-TO-RIGHT |
− | * common name:
| + | |
− | ** fructose-bisphosphate_aldolase
| + | |
| * ec number: | | * ec number: |
− | ** [http://enzyme.expasy.org/EC/4.1.2.13 EC-4.1.2.13] | + | ** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9] |
| * Synonym(s): | | * Synonym(s): |
| | | |
| == Reaction Formula == | | == Reaction Formula == |
| * With identifiers: | | * With identifiers: |
− | ** 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] | + | ** 1 [[CPD-7214]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7087]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
| * With common name(s): | | * With common name(s): |
− | ** 1 fructose 1,6-bisphosphate[c] '''<=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 glycerone phosphate[c] | + | ** 1 (2S)-dihydrotricetin[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 (+)-dihydromyricetin[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c] |
| | | |
| == Genes associated with this reaction == | | == Genes associated with this reaction == |
| Genes have been associated with this reaction based on different elements listed below. | | Genes have been associated with this reaction based on different elements listed below. |
− | * Gene: [[Tiso_gene_12272]] | + | * Gene: [[Tiso_gene_3330]] |
− | ** Source: [[annotation-in-silico_annotation]] | + | ** Source: [[orthology-athaliana]] |
− | *** Assignment: EC-NUMBER
| + | |
− | ** Source: [[annotation-experimental_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
| ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
− | * Gene: [[Tiso_gene_65]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[annotation-experimental_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[orthology-esiliculosus]]
| |
− | ** Source: [[orthology-creinhardtii]]
| |
− | * Gene: [[Tiso_gene_9119]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Assignment: AUTOMATED-NAME-MATCH
| |
− | * Gene: [[Tiso_gene_14568]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[annotation-experimental_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[orthology-esiliculosus]]
| |
− | * Gene: [[Tiso_gene_9179]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[annotation-experimental_annotation]]
| |
− | *** Assignment: EC-NUMBER
| |
− | ** Source: [[orthology-esiliculosus]]
| |
− | * Gene: [[Tiso_gene_9118]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Assignment: AUTOMATED-NAME-MATCH
| |
| == Pathways == | | == Pathways == |
− | * [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] | + | * [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152] |
− | ** '''9''' reactions found over '''10''' reactions in the full pathway
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
− | * [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
| + | |
− | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
| + | |
− | ** '''10''' reactions found over '''12''' reactions in the full pathway
| + | |
− | * [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
| + | |
− | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
| + | |
− | ** '''12''' reactions found over '''12''' reactions in the full pathway | + | |
− | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
| + | |
− | ** '''5''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
| + | |
− | ** '''10''' reactions found over '''10''' reactions in the full pathway
| + | |
− | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
| + | |
− | ** '''13''' reactions found over '''13''' reactions in the full pathway
| + | |
− | * [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
| + | |
− | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
| + | |
− | ** '''8''' reactions found over '''14''' reactions in the full pathway
| + | |
− | * [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
| + | |
− | ** '''11''' reactions found over '''11''' reactions in the full pathway
| + | |
− | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
| + | |
− | ** '''11''' reactions found over '''12''' reactions in the full pathway
| + | |
− | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
| + | |
− | ** '''13''' reactions found over '''13''' reactions in the full pathway
| + | |
| == Reconstruction information == | | == Reconstruction information == |
| * Category: [[orthology]] | | * Category: [[orthology]] |
− | ** Source: [[orthology-creinhardtii]] | + | ** Source: [[orthology-athaliana]] |
| *** Tool: [[pantograph]] | | *** Tool: [[pantograph]] |
| ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| *** Tool: [[pantograph]] | | *** Tool: [[pantograph]] |
− | * Category: [[manual]]
| |
− | ** Source: [[manual-primary_network]]
| |
− | * Category: [[annotation]]
| |
− | ** Source: [[annotation-in-silico_annotation]]
| |
− | *** Tool: [[pathwaytools]]
| |
− | ** Source: [[annotation-experimental_annotation]]
| |
− | *** Tool: [[pathwaytools]]
| |
| == External links == | | == External links == |
− | * RHEA:
| |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14729 14729]
| |
| * LIGAND-RXN: | | * LIGAND-RXN: |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R01068 R01068] | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05039 R05039] |
− | * UNIPROT:
| + | {{#set: direction=LEFT-TO-RIGHT}} |
− | ** [http://www.uniprot.org/uniprot/Q7LZE8 Q7LZE8]
| + | {{#set: ec number=EC-1.14.11.9}} |
− | ** [http://www.uniprot.org/uniprot/Q7M2K6 Q7M2K6]
| + | {{#set: gene associated=Tiso_gene_3330}} |
− | ** [http://www.uniprot.org/uniprot/P07764 P07764]
| + | {{#set: in pathway=PWY-5152}} |
− | ** [http://www.uniprot.org/uniprot/Q9URB4 Q9URB4]
| + | {{#set: reconstruction category=orthology}} |
− | ** [http://www.uniprot.org/uniprot/P14223 P14223]
| + | {{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}} |
− | ** [http://www.uniprot.org/uniprot/Q07159 Q07159]
| + | {{#set: reconstruction tool=pantograph}} |
− | ** [http://www.uniprot.org/uniprot/P07752 P07752]
| + | |
− | ** [http://www.uniprot.org/uniprot/P14540 P14540]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07341 P07341]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0AB71 P0AB71]
| + | |
− | ** [http://www.uniprot.org/uniprot/P04075 P04075]
| + | |
− | ** [http://www.uniprot.org/uniprot/P05062 P05062]
| + | |
− | ** [http://www.uniprot.org/uniprot/P09972 P09972]
| + | |
− | ** [http://www.uniprot.org/uniprot/P05064 P05064]
| + | |
− | ** [http://www.uniprot.org/uniprot/P05063 P05063]
| + | |
− | ** [http://www.uniprot.org/uniprot/P22197 P22197]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00883 P00883]
| + | |
− | ** [http://www.uniprot.org/uniprot/P27995 P27995]
| + | |
− | ** [http://www.uniprot.org/uniprot/P05065 P05065]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00884 P00884]
| + | |
− | ** [http://www.uniprot.org/uniprot/P09117 P09117]
| + | |
− | ** [http://www.uniprot.org/uniprot/P17784 P17784]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29356 P29356]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16096 P16096]
| + | |
− | ** [http://www.uniprot.org/uniprot/P08440 P08440]
| + | |
− | ** [http://www.uniprot.org/uniprot/P44429 P44429]
| + | |
− | ** [http://www.uniprot.org/uniprot/P13243 P13243]
| + | |
− | ** [http://www.uniprot.org/uniprot/O51401 O51401]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47269 P47269]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CED4 Q9CED4]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JW15 Q9JW15]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q59100 Q59100]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q59101 Q59101]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q7M4Z5 Q7M4Z5]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q7M4Z4 Q7M4Z4]
| + | |
− | ** [http://www.uniprot.org/uniprot/P19537 P19537]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q01516 Q01516]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q01517 Q01517]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q91384 Q91384]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52210 P52210]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q42690 Q42690]
| + | |
− | ** [http://www.uniprot.org/uniprot/P53447 P53447]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q7LZE9 Q7LZE9]
| + | |
− | ** [http://www.uniprot.org/uniprot/P53818 P53818]
| + | |
− | ** [http://www.uniprot.org/uniprot/P46257 P46257]
| + | |
− | ** [http://www.uniprot.org/uniprot/P46256 P46256]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q42476 Q42476]
| + | |
− | ** [http://www.uniprot.org/uniprot/P75089 P75089]
| + | |
− | ** [http://www.uniprot.org/uniprot/O22486 O22486]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q40677 Q40677]
| + | |
− | ** [http://www.uniprot.org/uniprot/O65581 O65581]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9SVJ6 Q9SVJ6]
| + | |
− | ** [http://www.uniprot.org/uniprot/P93565 P93565]
| + | |
− | ** [http://www.uniprot.org/uniprot/P50923 P50923]
| + | |
− | ** [http://www.uniprot.org/uniprot/O04975 O04975]
| + | |
− | ** [http://www.uniprot.org/uniprot/P36580 P36580]
| + | |
− | ** [http://www.uniprot.org/uniprot/P53444 P53444]
| + | |
− | {{#set: direction=REVERSIBLE}} | + | |
− | {{#set: common name=fructose-bisphosphate_aldolase}}
| + | |
− | {{#set: ec number=EC-4.1.2.13}} | + | |
− | {{#set: gene associated=Tiso_gene_12272|Tiso_gene_65|Tiso_gene_9119|Tiso_gene_14568|Tiso_gene_9179|Tiso_gene_9118}} | + | |
− | {{#set: in pathway=PWY-1042|P341-PWY|PWY66-399|SUCSYN-PWY|GLYCOLYSIS|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY-1861|PWY-6142|PWY-5484|P185-PWY|GLUCONEO-PWY}} | + | |
− | {{#set: reconstruction category=orthology|manual|annotation}} | + | |
− | {{#set: reconstruction source=orthology-creinhardtii|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}} | + | |
− | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | |
Genes have been associated with this reaction based on different elements listed below.