Difference between revisions of "RXN-8038"

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(Created page with "Category:Gene == Gene Tiso_gene_10095 == * right end position: ** 5213 * transcription direction: ** NEGATIVE * left end position: ** 3189 * centisome position: ** 36.1400...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.5.1...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_10095 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] ==
* right end position:
+
* direction:
** 5213
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** REVERSIBLE
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/5.5.1 EC-5.5.1]
* left end position:
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** 3189
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* centisome position:
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** 36.14007   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[1.5.1.9-RXN]]
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* With identifiers:
** Source: [[annotation-in-silico_annotation]]
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** 1 [[NEUROSPORENE]][c] '''<=>''' 1 [[CPD-7419]][c]
*** Assignment: automated-name-match
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* With common name(s):
== Pathways associated ==
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** 1 all-trans neurosporene[c] '''<=>''' 1 &beta;-zeacarotene[c]
* [[LYSINE-DEG1-PWY]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_8263]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3577]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6282]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_11980]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4457]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_1547]]
 +
** Source: [[orthology-athaliana]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: right end position=5213}}
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* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04801 R04801]
{{#set: left end position=3189}}
+
{{#set: direction=REVERSIBLE}}
{{#set: centisome position=36.14007    }}
+
{{#set: ec number=EC-5.5.1}}
{{#set: reaction associated=1.5.1.9-RXN}}
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{{#set: gene associated=Tiso_gene_8263|Tiso_gene_3577|Tiso_gene_6282|Tiso_gene_11980|Tiso_gene_4457|Tiso_gene_1547}}
{{#set: pathway associated=LYSINE-DEG1-PWY}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN-8038

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans neurosporene[c] <=> 1 β-zeacarotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links