Difference between revisions of "RXN0-6479"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6479 RXN0-6479] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6479 RXN0-6479] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** exosome_complex_exonuclease | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** n [[WATER]][c] '''+''' 1 [[CPD0-2351]][c] '''=>''' n [[Nucleoside-Monophosphates]][c] '''+''' 1 [[CPD0-2352]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** n H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] '''=>''' n a nucleoside 5'-monophosphate[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_11612]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * Gene: [[ | + | *** Assignment: EC-NUMBER |
| − | ** Source: [[ | + | * Gene: [[Tiso_gene_11613]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479] |
| − | ** ''' | + | ** '''4''' reactions found over '''10''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| − | |||
| − | |||
| − | |||
| − | |||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: common name=exosome_complex_exonuclease}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-3.1.13.1}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=Tiso_gene_11612|Tiso_gene_11613}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=PWY0-1479}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:22, 21 March 2018
Contents
Reaction RXN0-6479
- direction:
- LEFT-TO-RIGHT
- common name:
- exosome_complex_exonuclease
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- n WATER[c] + 1 CPD0-2351[c] => n Nucleoside-Monophosphates[c] + 1 CPD0-2352[c]
- With common name(s):
- n H2O[c] + 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] => n a nucleoside 5'-monophosphate[c] + 1 a tRNA precursor with a 5' extension and a short 3' extension[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11612
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_11613
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
