Difference between revisions of "Tiso gene 7948"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_7948 == * right end position: ** 8322 * transcription direction: ** POSITIVE * left end position: ** 7283 * centisome position: ** 68.23122...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] ==
+
== Gene Tiso_gene_7948 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8322
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
+
** POSITIVE
 +
* left end position:
 +
** 7283
 +
* centisome position:
 +
** 68.23122   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CYTOCHROME-C-OXIDASE-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 isovaleryl-CoA[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 3-methylcrotonyl-CoA[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_18542]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
* Reaction: [[RXN-15830]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-6692]]
 +
* [[PWY-7279]]
 +
* [[PWY-3781]]
 +
* [[PWY-4521]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=8322}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12276 12276]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=7283}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096]
+
{{#set: centisome position=68.23122    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=CYTOCHROME-C-OXIDASE-RXN|RXN-15830}}
−
{{#set: ec number=EC-1.3.8.4}}
+
{{#set: pathway associated=PWY-6692|PWY-7279|PWY-3781|PWY-4521}}
−
{{#set: gene associated=Tiso_gene_18542}}
+
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_7948

  • right end position:
    • 8322
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7283
  • centisome position:
    • 68.23122
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7948&oldid=48324"