Difference between revisions of "P163-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE] == * smiles: ** CC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.7.1.173 EC-2.7.1.173]
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** InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L
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* common name:
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** 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
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* molecular weight:
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** 276.076   
 
* Synonym(s):
 
* Synonym(s):
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** ME-2,4cPP
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-882]]
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** 1 [[CPD-8259]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-15878]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 β-D-ribosylnicotinate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 H+[c]
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* [[RXN0-302]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[HDS]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12183]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18221]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12316]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_12252]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12827]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18943]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_4902]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8561]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15010]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_14030]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17047]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8616]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6111]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_19579]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_13724]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_4145]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4144]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15483]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17530]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2752]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_9582]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14059]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_19151]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12450]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1894]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16455]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13509]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_2262]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12828]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_19763]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17980]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_19611]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8480]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_1696]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17305]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17795]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25568 25568]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21605869 21605869]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R03347 R03347]
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** [http://www.chemspider.com/Chemical-Structure.10241147.html 10241147]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: ec number=EC-2.7.1.173}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58483 58483]
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{{#set: gene associated=Tiso_gene_12183|Tiso_gene_18221|Tiso_gene_12316|Tiso_gene_12252|Tiso_gene_12827|Tiso_gene_18943|Tiso_gene_4902|Tiso_gene_8561|Tiso_gene_15010|Tiso_gene_14030|Tiso_gene_17047|Tiso_gene_8616|Tiso_gene_6111|Tiso_gene_19579|Tiso_gene_13724|Tiso_gene_4145|Tiso_gene_4144|Tiso_gene_15483|Tiso_gene_17530|Tiso_gene_2752|Tiso_gene_9582|Tiso_gene_14059|Tiso_gene_19151|Tiso_gene_12450|Tiso_gene_1894|Tiso_gene_16455|Tiso_gene_13509|Tiso_gene_2262|Tiso_gene_12828|Tiso_gene_19763|Tiso_gene_17980|Tiso_gene_19611|Tiso_gene_8480|Tiso_gene_1696|Tiso_gene_17305|Tiso_gene_17795}}
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* BIGG : 2mecdp
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{{#set: in pathway=PWY-5381}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11453 C11453]
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: inchi key=InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L}}
 +
{{#set: common name=2-C-methyl-D-erythritol-2,4-cyclodiphosphate}}
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{{#set: molecular weight=276.076    }}
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{{#set: common name=ME-2,4cPP}}
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{{#set: consumed by=RXN0-882|RXN-15878}}
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{{#set: produced by=RXN0-302}}
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{{#set: consumed or produced by=HDS}}

Revision as of 17:31, 10 January 2018

Metabolite 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE

  • smiles:
    • CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)
  • inchi key:
    • InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L
  • common name:
    • 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
  • molecular weight:
    • 276.076
  • Synonym(s):
    • ME-2,4cPP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)" cannot be used as a page name in this wiki.




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