Difference between revisions of "Tiso gene 18328"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
(Created page with "Category:Gene == Gene Tiso_gene_18328 == * right end position: ** 3032 * transcription direction: ** POSITIVE * left end position: ** 487 * centisome position: ** 15.76562...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] ==
+
== Gene Tiso_gene_18328 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 3032
−
* common name:
+
* transcription direction:
−
** geranylgeranyl_diphosphate_reductase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
+
** 487
 +
* centisome position:
 +
** 15.765620   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
−
** 1 [[CPD-7005]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[CHLOROPHYLL-A]][c]
+
−
* With common name(s):
+
−
** 1 geranylgeranyl chlorophyll a[c] '''+''' 3 H+[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 chlorophyll a[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_2613]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: ec-number
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
** Source: [[orthology-synechocystis]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
−
== Pathways  ==
+
* Reaction: [[HPPD]]
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pantograph]]
+
* Reaction: [[RXN-10815]]
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-1581]]
 +
* [[PWY-7432]]
 +
* [[TYRFUMCAT-PWY]]
 +
* [[PWY-1422]]
 +
* [[PWY-6318]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=3032}}
−
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-1.3.1.83}}
+
{{#set: left end position=487}}
−
{{#set: gene associated=Tiso_gene_2613}}
+
{{#set: centisome position=15.765620    }}
−
{{#set: in pathway=}}
+
{{#set: reaction associated=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN|HPPD|RXN-10815}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: pathway associated=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422|PWY-6318}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_18328

  • right end position:
    • 3032
  • transcription direction:
    • POSITIVE
  • left end position:
    • 487
  • centisome position:
    • 15.765620
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18328&oldid=48542"