Difference between revisions of "Tiso gene 19734"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] == * direction: ** REVERSIBLE * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_19734 == * right end position: ** 1723 * transcription direction: ** NEGATIVE * left end position: ** 198 * centisome position: ** 9.542169...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] ==
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== Gene Tiso_gene_19734 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1723
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
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** NEGATIVE
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* left end position:
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** 198
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* centisome position:
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** 9.542169   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENYL-KIN-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ATCM]]
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** 1 coenzyme A[c] '''+''' 1 2-methylacetoacetyl-CoA[c] '''<=>''' 1 acetyl-CoA[c] '''+''' 1 propanoyl-CoA[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ATDCM]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-11832]]
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* Gene: [[Tiso_gene_16181]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17451]]
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* Reaction: [[RXN-12002]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_15327]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
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* Reaction: [[RXN-7913]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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*** Assignment: ec-number
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-7219]]
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* [[PWY-7205]]
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* [[PWY-7197]]
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* [[PWY-7176]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1723}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=198}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
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{{#set: centisome position=9.542169    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=ADENYL-KIN-RXN|ATCM|ATDCM|RXN-11832|RXN-12002|RXN-7913}}
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{{#set: ec number=EC-2.3.1.9}}
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{{#set: pathway associated=PWY-7219|PWY-7205|PWY-7197|PWY-7176}}
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{{#set: gene associated=Tiso_gene_16181|Tiso_gene_17451|Tiso_gene_15327}}
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{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:25, 21 March 2018

Gene Tiso_gene_19734

  • right end position:
    • 1723
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 198
  • centisome position:
    • 9.542169
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19734&oldid=48568"