Difference between revisions of "RXN1F-10"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYROXINE-DEIODINASE-RXN THYROXINE-DEIODINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-10 RXN1F-10] == * direction: ** REVERSIBLE * common name: ** ORF ** protochlorophyllide_reduc...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYROXINE-DEIODINASE-RXN THYROXINE-DEIODINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-10 RXN1F-10] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** type_i_iodothyronine_deiodinase
+
** ORF
 +
** protochlorophyllide_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.21.99.4 EC-1.21.99.4]
+
** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-THYROXINE]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CPD-387]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[LIOTHYRONINE]][c]
+
** 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[MONO-VINYL-PROTOCHLOROPHYLLIDE-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-thyroxine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 iodide[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 3,5,3'-triiodo-L-thyronine[c]
+
** 1 chlorophyllide a[c] '''+''' 1 NADP+[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 protochlorophyllide a[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_20481]]
+
* Gene: [[Tiso_gene_19518]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_10077]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17141]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6261]], thyroid hormone metabolism II (via conjugation and/or degradation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6261 PWY-6261]
 
−
** '''11''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-6260]], thyroid hormone metabolism I (via deiodination): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260]
 
−
** '''3''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19745 19745]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11132 11132]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03734 R03734]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03845 R03845]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21195 P21195]
+
** [http://www.uniprot.org/uniprot/Q3J1A0 Q3J1A0]
−
** [http://www.uniprot.org/uniprot/P49897 P49897]
+
** [http://www.uniprot.org/uniprot/Q02432 Q02432]
−
** [http://www.uniprot.org/uniprot/P49898 P49898]
+
** [http://www.uniprot.org/uniprot/Q9RFD4 Q9RFD4]
−
** [http://www.uniprot.org/uniprot/P05307 P05307]
+
** [http://www.uniprot.org/uniprot/Q9Z5D9 Q9Z5D9]
−
** [http://www.uniprot.org/uniprot/P09102 P09102]
+
** [http://www.uniprot.org/uniprot/Q9RFD6 Q9RFD6]
−
** [http://www.uniprot.org/uniprot/P07237 P07237]
+
** [http://www.uniprot.org/uniprot/O66148 O66148]
−
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
+
** [http://www.uniprot.org/uniprot/Q9ZGE9 Q9ZGE9]
−
** [http://www.uniprot.org/uniprot/P04785 P04785]
+
** [http://www.uniprot.org/uniprot/Q9ZGF0 Q9ZGF0]
−
** [http://www.uniprot.org/uniprot/P24389 P24389]
+
** [http://www.uniprot.org/uniprot/P21218 P21218]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/P41646 P41646]
−
{{#set: common name=type_i_iodothyronine_deiodinase}}
+
** [http://www.uniprot.org/uniprot/P56303 P56303]
−
{{#set: ec number=EC-1.21.99.4}}
+
** [http://www.uniprot.org/uniprot/P56302 P56302]
−
{{#set: gene associated=Tiso_gene_20481}}
+
** [http://www.uniprot.org/uniprot/P48100 P48100]
−
{{#set: in pathway=PWY-6261|PWY-6260}}
+
** [http://www.uniprot.org/uniprot/P48110 P48110]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P48099 P48099]
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/O48741 O48741]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P73480 P73480]
 +
** [http://www.uniprot.org/uniprot/Q55607 Q55607]
 +
** [http://www.uniprot.org/uniprot/P51278 P51278]
 +
** [http://www.uniprot.org/uniprot/P51188 P51188]
 +
** [http://www.uniprot.org/uniprot/P51187 P51187]
 +
** [http://www.uniprot.org/uniprot/Q39617 Q39617]
 +
** [http://www.uniprot.org/uniprot/P56291 P56291]
 +
** [http://www.uniprot.org/uniprot/Q7M189 Q7M189]
 +
** [http://www.uniprot.org/uniprot/P36208 P36208]
 +
** [http://www.uniprot.org/uniprot/P36437 P36437]
 +
** [http://www.uniprot.org/uniprot/Q41578 Q41578]
 +
** [http://www.uniprot.org/uniprot/Q04607 Q04607]
 +
** [http://www.uniprot.org/uniprot/Q02431 Q02431]
 +
** [http://www.uniprot.org/uniprot/O22597 O22597]
 +
** [http://www.uniprot.org/uniprot/Q00864 Q00864]
 +
** [http://www.uniprot.org/uniprot/P29683 P29683]
 +
** [http://www.uniprot.org/uniprot/P26177 P26177]
 +
** [http://www.uniprot.org/uniprot/P26180 P26180]
 +
** [http://www.uniprot.org/uniprot/P17652 P17652]
 +
** [http://www.uniprot.org/uniprot/P15904 P15904]
 +
** [http://www.uniprot.org/uniprot/P13653 P13653]
 +
** [http://www.uniprot.org/uniprot/P26156 P26156]
 +
** [http://www.uniprot.org/uniprot/P28372 P28372]
 +
** [http://www.uniprot.org/uniprot/Q41249 Q41249]
 +
** [http://www.uniprot.org/uniprot/P26179 P26179]
 +
** [http://www.uniprot.org/uniprot/P26163 P26163]
 +
** [http://www.uniprot.org/uniprot/P26178 P26178]
 +
** [http://www.uniprot.org/uniprot/P26164 P26164]
 +
** [http://www.uniprot.org/uniprot/P26237 P26237]
 +
** [http://www.uniprot.org/uniprot/P26238 P26238]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=protochlorophyllide_reductase}}
 +
{{#set: ec number=EC-1.3.1.33}}
 +
{{#set: gene associated=Tiso_gene_19518|Tiso_gene_10077|Tiso_gene_17141}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction RXN1F-10

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • protochlorophyllide_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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