Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.9-RXN 3.4.11.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xaa-pro_aminopeptidas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARSYN-RXN AICARSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.9-RXN 3.4.11.9-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARSYN-RXN AICARSYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** xaa-pro_aminopeptidase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.11.9 EC-3.4.11.9]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Peptides-holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c] '''+''' 1 [[Amino-Acids-20]][c]
+
** 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[AICAR]][c] '''+''' 1 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a peptide[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c] '''+''' 1 a proteinogenic amino acid[c]
+
** 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] '''<=>''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_16185]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_14456]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_13488]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_13489]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23920 23920]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P44881 P44881]
+
** [http://www.uniprot.org/uniprot/P21265 P21265]
−
** [http://www.uniprot.org/uniprot/P15034 P15034]
+
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
−
** [http://www.uniprot.org/uniprot/P47566 P47566]
+
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
−
** [http://www.uniprot.org/uniprot/P0A3Z2 P0A3Z2]
+
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
−
** [http://www.uniprot.org/uniprot/Q95333 Q95333]
+
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
−
** [http://www.uniprot.org/uniprot/Q09795 Q09795]
+
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/O65180 O65180]
−
{{#set: common name=xaa-pro_aminopeptidase}}
+
** [http://www.uniprot.org/uniprot/P12047 P12047]
−
{{#set: ec number=EC-3.4.11.9}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=Tiso_gene_16185|Tiso_gene_14456|Tiso_gene_13488|Tiso_gene_13489}}
+
{{#set: ec number=EC-4.3.2.2}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:26, 21 March 2018

Reaction AICARSYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] <=> 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1 fumarate[c]

Genes associated with this reaction

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=AICARSYN-RXN&oldid=48705"