Difference between revisions of "Tiso gene 3326"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxal_kinase * ec numbe...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-RIBOSE-5P DEOXY-RIBOSE-5P] == * common name: ** 2-deoxy-D-ribose 5-phosphate * Synonym(s)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-RIBOSE-5P DEOXY-RIBOSE-5P] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** pyridoxal_kinase
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** 2-deoxy-D-ribose 5-phosphate
* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[ATP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[RXN-14223]]
** 1 ATP[c] '''+''' 1 pyridoxine[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 pyridoxine 5'-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6106]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=2-deoxy-D-ribose 5-phosphate}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25108 25108]
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{{#set: consumed or produced by=RXN-14223}}
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxal_kinase}}
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{{#set: ec number=EC-2.7.1.35}}
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{{#set: gene associated=Tiso_gene_6106}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:32, 10 January 2018

Metabolite DEOXY-RIBOSE-5P

  • common name:
    • 2-deoxy-D-ribose 5-phosphate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links