Difference between revisions of "Tiso gene 1416"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(Created page with "Category:Gene == Gene Tiso_gene_600 == * left end position: ** 18916 * transcription direction: ** POSITIVE * right end position: ** 20173 * centisome position: ** 60.8016...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
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== Gene Tiso_gene_600 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 18916
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.7.3 EC-1.3.7.3]
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** POSITIVE
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* right end position:
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** 20173
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* centisome position:
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** 60.801643   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[MALTODEXGLUCOSID-RXN]]
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** 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[3Z-PHYCOERYTHROBILIN]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 15,16-dihydrobiliverdin[c] '''+''' 2 H+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (3Z)-phycoerythrobilin[c]
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* [[RXN-14281]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14282]]
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* [[Tiso_gene_17350]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***automated-name-match
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== Pathways  ==
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* [[RXN-14283]]
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* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
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** in-silico_annotation
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** '''1''' reactions found over '''4''' reactions in the full pathway
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***automated-name-match
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* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
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* [[RXN-15910]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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** in-silico_annotation
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== Reconstruction information  ==
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***automated-name-match
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* [[orthology]]:
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* [[RXN0-5183]]
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** [[pantograph]]:
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** in-silico_annotation
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*** [[esiliculosus]]
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***automated-name-match
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== Pathways associated ==
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* [[PWY-842]]
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* [[GLYCOCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=18916}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=20173}}
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{{#set: ec number=EC-1.3.7.3}}
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{{#set: centisome position=60.801643    }}
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{{#set: gene associated=Tiso_gene_17350}}
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{{#set: reaction associated=MALTODEXGLUCOSID-RXN|RXN-14281|RXN-14282|RXN-14283|RXN-15910|RXN0-5183}}
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{{#set: in pathway=PWY-5915|PWY-7579}}
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{{#set: pathway associated=PWY-842|GLYCOCAT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 16:33, 10 January 2018

Gene Tiso_gene_600

  • left end position:
    • 18916
  • transcription direction:
    • POSITIVE
  • right end position:
    • 20173
  • centisome position:
    • 60.801643
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1416&oldid=13555"