Difference between revisions of "CPD-8652"

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(Created page with "Category:Gene == Gene Tiso_gene_11577 == * left end position: ** 4767 * transcription direction: ** POSITIVE * right end position: ** 7625 * centisome position: ** 61.8608...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_11577 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] ==
* left end position:
+
* direction:
** 4767
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** polyketide_synthase
* right end position:
+
** ORF
** 7625
+
** acyl-_synthetase
* centisome position:
+
** long_chain_acyl-_synthetase
** 61.86089   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CO-A]][c] '''+''' 1 [[PRISTANATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14675]][c] '''+''' 1 [[PPI]][c]
***automated-name-match
+
* With common name(s):
== Pathways associated ==
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** 1 coenzyme A[c] '''+''' 1 pristanate[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 pristanoyl-CoA[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_348]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_135]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7855]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4191]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_500]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4767}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=polyketide_synthase}}
{{#set: right end position=7625}}
+
{{#set: common name=ORF}}
{{#set: centisome position=61.86089    }}
+
{{#set: common name=acyl-_synthetase}}
{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
 +
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_348|Tiso_gene_136|Tiso_gene_135|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_9394|Tiso_gene_500}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:36, 10 January 2018

Reaction RXN66-484

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
    • acyl-_synthetase
    • long_chain_acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 pristanate[c] + 1 ATP[c] => 1 AMP[c] + 1 pristanoyl-CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links