Difference between revisions of "RXN-14116"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/1.11.1.6 EC-1.11.1.6]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/1.11.1.21 EC-1.11.1.21]
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* common name:
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−
** pyrimidine ribonucleosides salvage II
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[URIDINE-NUCLEOSIDASE-RXN]]
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** 2 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
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** [[CYTIDEAM2-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 2 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 oxygen[c]
−
* '''0''' reaction(s) not found
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_12499]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_11916]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_5435]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_3006]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_11607]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_4990]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_15923]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_19683]]
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** [[pantograph]]-[[synechocystis]]
 +
== Pathways  ==
 +
* [[PWY-5506]], methanol oxidation to formaldehyde IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[DETOX1-PWY]], superoxide radicals degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
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* [[annotation]]:
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** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6556 PWY-6556]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00009 R00009]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P11934 P11934]
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{{#set: common name=pyrimidine ribonucleosides salvage II}}
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** [http://www.uniprot.org/uniprot/P24270 P24270]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P21179 P21179]
−
{{#set: reaction not found=0}}
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** [http://www.uniprot.org/uniprot/P24168 P24168]
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** [http://www.uniprot.org/uniprot/Q7M184 Q7M184]
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** [http://www.uniprot.org/uniprot/P0A327 P0A327]
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** [http://www.uniprot.org/uniprot/P45737 P45737]
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** [http://www.uniprot.org/uniprot/P42321 P42321]
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** [http://www.uniprot.org/uniprot/O28050 O28050]
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** [http://www.uniprot.org/uniprot/Q59337 Q59337]
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** [http://www.uniprot.org/uniprot/P77872 P77872]
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** [http://www.uniprot.org/uniprot/P00432 P00432]
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** [http://www.uniprot.org/uniprot/P15202 P15202]
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** [http://www.uniprot.org/uniprot/P06115 P06115]
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** [http://www.uniprot.org/uniprot/P07820 P07820]
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** [http://www.uniprot.org/uniprot/P17750 P17750]
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** [http://www.uniprot.org/uniprot/P13029 P13029]
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** [http://www.uniprot.org/uniprot/P17336 P17336]
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** [http://www.uniprot.org/uniprot/P04040 P04040]
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** [http://www.uniprot.org/uniprot/P25890 P25890]
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** [http://www.uniprot.org/uniprot/P04762 P04762]
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** [http://www.uniprot.org/uniprot/P29756 P29756]
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** [http://www.uniprot.org/uniprot/P44390 P44390]
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** [http://www.uniprot.org/uniprot/P42234 P42234]
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** [http://www.uniprot.org/uniprot/Q9JRF5 Q9JRF5]
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** [http://www.uniprot.org/uniprot/P94377 P94377]
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** [http://www.uniprot.org/uniprot/Q9ZKX5 Q9ZKX5]
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** [http://www.uniprot.org/uniprot/Q59296 Q59296]
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** [http://www.uniprot.org/uniprot/P55306 P55306]
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** [http://www.uniprot.org/uniprot/P26901 P26901]
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** [http://www.uniprot.org/uniprot/P14412 P14412]
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** [http://www.uniprot.org/uniprot/P07145 P07145]
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** [http://www.uniprot.org/uniprot/P17598 P17598]
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** [http://www.uniprot.org/uniprot/Q41136 Q41136]
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** [http://www.uniprot.org/uniprot/P30567 P30567]
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** [http://www.uniprot.org/uniprot/P30263 P30263]
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** [http://www.uniprot.org/uniprot/P29422 P29422]
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** [http://www.uniprot.org/uniprot/P30266 P30266]
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** [http://www.uniprot.org/uniprot/P37743 P37743]
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** [http://www.uniprot.org/uniprot/P33569 P33569]
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** [http://www.uniprot.org/uniprot/P18123 P18123]
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** [http://www.uniprot.org/uniprot/P55303 P55303]
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** [http://www.uniprot.org/uniprot/Q01297 Q01297]
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** [http://www.uniprot.org/uniprot/P49318 P49318]
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** [http://www.uniprot.org/uniprot/P18122 P18122]
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** [http://www.uniprot.org/uniprot/P49315 P49315]
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** [http://www.uniprot.org/uniprot/Q27710 Q27710]
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** [http://www.uniprot.org/uniprot/P45739 P45739]
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** [http://www.uniprot.org/uniprot/P0A323 P0A323]
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** [http://www.uniprot.org/uniprot/P55307 P55307]
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** [http://www.uniprot.org/uniprot/P55308 P55308]
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** [http://www.uniprot.org/uniprot/P55305 P55305]
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** [http://www.uniprot.org/uniprot/P50979 P50979]
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** [http://www.uniprot.org/uniprot/Q55110 Q55110]
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** [http://www.uniprot.org/uniprot/P12365 P12365]
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** [http://www.uniprot.org/uniprot/P73911 P73911]
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** [http://www.uniprot.org/uniprot/P77038 P77038]
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** [http://www.uniprot.org/uniprot/P25819 P25819]
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** [http://www.uniprot.org/uniprot/O48562 O48562]
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** [http://www.uniprot.org/uniprot/Q43206 Q43206]
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** [http://www.uniprot.org/uniprot/O22472 O22472]
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** [http://www.uniprot.org/uniprot/P30265 P30265]
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** [http://www.uniprot.org/uniprot/P48351 P48351]
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** [http://www.uniprot.org/uniprot/P48352 P48352]
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** [http://www.uniprot.org/uniprot/Q39633 Q39633]
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** [http://www.uniprot.org/uniprot/Q39634 Q39634]
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** [http://www.uniprot.org/uniprot/P32290 P32290]
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** [http://www.uniprot.org/uniprot/O81336 O81336]
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** [http://www.uniprot.org/uniprot/O81337 O81337]
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** [http://www.uniprot.org/uniprot/P49317 P49317]
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** [http://www.uniprot.org/uniprot/Q27487 Q27487]
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** [http://www.uniprot.org/uniprot/Q8MYL7 Q8MYL7]
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** [http://www.uniprot.org/uniprot/Q9Z598 Q9Z598]
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** [http://www.uniprot.org/uniprot/O61235 O61235]
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** [http://www.uniprot.org/uniprot/O33613 O33613]
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** [http://www.uniprot.org/uniprot/P77948 P77948]
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** [http://www.uniprot.org/uniprot/O73955 O73955]
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** [http://www.uniprot.org/uniprot/O59651 O59651]
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** [http://www.uniprot.org/uniprot/O31066 O31066]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.11.1.6}}
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{{#set: ec number=EC-1.11.1.21}}
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{{#set: gene associated=Tiso_gene_12499|Tiso_gene_11916|Tiso_gene_5435|Tiso_gene_3006|Tiso_gene_11607|Tiso_gene_4990|Tiso_gene_15923|Tiso_gene_19683}}
 +
{{#set: in pathway=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=synechocystis}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:37, 10 January 2018

Reaction CATAL-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5506, methanol oxidation to formaldehyde IV: PWY-5506
    • 1 reactions found over 2 reactions in the full pathway
  • DETOX1-PWY-1, reactive oxygen species degradation: DETOX1-PWY-1
    • 5 reactions found over 6 reactions in the full pathway
  • DETOX1-PWY, superoxide radicals degradation: DETOX1-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14116&oldid=13863"